Janthinobacterium rivuli: P9875_24930
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Entry
P9875_24930 CDS
T09016
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
jri
Janthinobacterium rivuli
Pathway
jri01501
beta-Lactam resistance
jri01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
P9875_24930
01503 Cationic antimicrobial peptide (CAMP) resistance
P9875_24930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jri02000
]
P9875_24930
01504 Antimicrobial resistance genes [BR:
jri01504
]
P9875_24930
Transporters [BR:
jri02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
P9875_24930
Antimicrobial resistance genes [BR:
jri01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
P9875_24930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
HMA
HisG
SecD_SecF_C
Col_cuticle_N
Motif
Other DBs
NCBI-ProteinID:
WFR78906
LinkDB
All DBs
Position
5494830..5497946
Genome browser
AA seq
1038 aa
AA seq
DB search
MNFSSLSIKNPIPAIMLFVLLTLAGLLAYKANPVQDFPDIELPIVTVSAVLPGAAPAQLE
TEVARKIEDSVATLQGVKNIYTKVLDGVVTVTVEFILEKQIAEAVNDVRDAVARVKADMP
AELRDPTVTKASTAGRVVLTFIATAKPGVDNPLDAPDLSWFVDNTVAKRLLTVPGVGAVT
RVGGVYREIQVELDEARMAALKVSALDVSRQLRLVQREAPGGRGDISGAEQSVRTIATVK
TADELSRVEVPLPDGRHVRLDQVATVRDTIAEPRALAEQDGKTVVAFEVFRTKGASEVAV
AKGARDAIADLQKENPNVVLQQSIDNAFPVEENFDGSMELLYEGALLAVLVVWWFLRDWR
ATLVAAAALPLSVMPAFLGIYWFGYTLNTVTLLSLALVVGVLVDDAIVEIENIERHLRMG
KSPMEAAMEAADEIGMAVIATTFALVAVFLPTAFMSGIPGLFFKQFGWTAVLAVLASLVV
ARLLTPMMAAYILKPLPHKEEQDGWLMTRYLTVMRWCLNHRGITAIAAALFFVGAIALVP
LLPTGFVPAADRAQTQINLELPPGSTLGETQAVAALARDAAMRTPGIQGVFSSIGGGSSG
DAFAPGAAAEARRAVLTLTTVHRTERKESMADLETQLRNKLDTIPGARFTVGPPDTGVKM
QLVLRSEDPVALMAAAQKVERELRGLKGIGNVNSSASLVRPEIIVRPDFAKAADLGVTAA
AIGETVRVATAGDYDTDLTKMNLPERQVPIRVKLPNSVRADLAAIERLTVPGKNGPVRLA
NVATVTMESGPAQIDRLNRSRNVTLDVELGSRTLGELNVEARALPSMKNLPPSVKIAELG
DAQEMASLFASFGLAMLIGVLCIYCVLVLLFKDFMQPVTILAALPLSIGGAFVALLITGS
ALSMPSMIGLIMLMGIVTKNSILLVDYAILARQAGMNRFDALVDACHKRSRPILMTTIAM
GAGMMPLALGWGADPSFRSPMAITVIGGLITSTLLSLLVVPAVFTYIDDLEHLLKRGMAK
LRRQKAPPRRDDKVALEK
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttcctccctctcgatcaagaatccgatcccggccatcatgctgttcgtgctg
ctgaccctggccggtctgctggcctacaaggccaatccggtgcaggatttccccgacatc
gaactgcccatcgtcaccgtcagcgcggtgctgcccggcgccgcgccggcccagctggaa
acggaagtggcgcgcaagatcgaagactccgtcgccaccttgcaaggcgtgaaaaacatc
tacaccaaggtgctcgatggcgtcgtcacggtgaccgtcgaattcatcctggaaaagcag
atcgccgaagccgtcaacgatgtgcgcgacgccgtcgcccgcgtgaaagcggacatgccg
gccgagctgcgcgaccccaccgtcaccaaggcttccaccgccggcagggtcgtgctgacc
tttatcgccacggccaaacccggtgtcgataatccgctcgatgcgcccgacctgtcctgg
ttcgtcgacaacacggtggccaagcgcctcctgaccgtgcccggcgtgggcgccgtcacc
cgtgtcggcggcgtgtaccgcgagatccaggtggaactcgacgaggcgcgcatggccgca
ttgaaggtgtcggctctcgacgtctcgcgccagctgcgcctggtgcagcgcgaagcgcct
ggcggccggggcgacatcagcggcgccgagcagtcggtgcgcaccatcgccaccgtgaaa
acggccgatgaactgtcgcgcgtcgaagtgccgctgccggacgggcgccatgtgcgcctg
gaccaggtcgccaccgtgcgcgacacgatcgccgaaccgcgcgcgctggccgagcaggat
ggcaagacggtcgtcgcctttgaagtattccgcaccaagggcgccagcgaagtggccgtc
gccaagggcgcgcgcgacgccatcgccgacctgcagaaggaaaacccgaacgtggtgctg
cagcagtcgatcgacaatgccttccccgtcgaggaaaacttcgacggctcgatggagctg
ctgtacgaaggcgcgctgctggccgtgctggtggtgtggtggttcctgcgcgactggcgc
gccaccctggtggccgcggccgccctgcccctgtccgtgatgccggccttcctcggcatc
tactggttcggctacacgctcaataccgtcaccctgctgtcgctggccctcgtcgtcggc
gtgctggtcgacgatgccatcgtggaaatcgaaaacatcgagcgccatctgcgcatgggc
aagtcgccgatggaagcggccatggaagcggccgatgaaatcggcatggcggtcatcgcc
accaccttcgcgctggtggccgtgttcctgccgacagccttcatgagcggcattcccggc
ctgttcttcaagcagttcggctggacggccgtgctggccgtgctggcgtccctggtggta
gcgcggttgctcacgccaatgatggccgcctacatattgaaaccgctgccgcacaaggaa
gagcaggatggctggctgatgacgcgctatctgacggtcatgcgctggtgcctgaaccac
cgcggcatcacggccatcgccgctgccctgttctttgtcggcgccatcgcgctcgtgccg
ctgctgccgaccggtttcgtgccggccgccgaccgcgcacagacgcagatcaacctggaa
ctgccgcccggctccaccctgggcgaaacgcaggccgtggcagccctggcacgcgatgcg
gccatgcgcacgcctggcatccagggcgtcttcagttcgataggcggcggctccagcggc
gacgccttcgcccccggcgcggcagccgaggcgcgccgcgccgtgctgaccctgaccacc
gtgcaccgcaccgagcgcaaggaatcgatggcggacctggaaacgcagttgcgcaacaag
ctcgataccatccccggcgcccgcttcacggtgggaccgcccgacacgggcgtcaagatg
cagctggtgctgcgttcggaagacccggtggcactgatggcggcagcgcaaaaggtcgag
cgcgagctgcgcggcctgaaaggcatcggcaacgtcaattccagcgcctcgctggtgcgc
ccggaaatcatcgtgcgtcctgatttcgccaaggcggccgacctgggcgtgacggcggca
gccatcggcgaaaccgtgcgcgtggccacggccggcgactacgacacggacctgacgaaa
atgaacctgcccgagcggcaagtgccgatccgcgtcaagctgcccaacagcgtgcgcgcc
gacctggccgccatcgagcgcctgaccgtgcccggcaagaatggcccggtgcgcctggcg
aacgtggccacggtgacgatggaaagcggcccggcgcagatcgaccgcttgaaccgcagc
cgcaacgtgaccctcgacgtggaactcggctcgcgcaccctcggtgaattgaacgtggaa
gcgcgcgcgctgccgtcgatgaagaatttgccgccatccgtgaagatcgccgaactgggc
gacgcgcaggagatggcctcgctgttcgccagcttcggcctggccatgctgatcggcgtg
ctgtgcatctactgcgtgctggtgctgctgttcaaggacttcatgcagccggtgaccatc
ctggcggcgctgccgctgtcgatcggcggcgccttcgtggcgctcttgatcacgggcagc
gccctgtcgatgccgtcgatgatcggcctgatcatgctgatggggatcgtcaccaagaac
tcgatcctgctggtcgactatgcgatcctggcacgccaggcgggcatgaaccgcttcgat
gcgctggtcgacgcctgccacaagcgcagccgtcccatcctgatgacgacgattgccatg
ggcgccggcatgatgccgctggcgctgggctggggcgccgaccccagcttccgttcgccg
atggccatcaccgtcatcggcggcctgatcacctcgaccttattgagcctgctggtggtg
ccggccgtgttcacctacatcgacgacctggagcacctgctcaagcgcggcatggcgaaa
ctgcgccgccagaaggcgccgccgcggcgcgatgacaaggtggcgctggaaaaataa
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