Kitasatospora albolonga: B7C62_26540
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Entry
B7C62_26540 CDS
T05009
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
kab
Kitasatospora albolonga
Pathway
kab03030
DNA replication
kab03410
Base excision repair
kab03420
Nucleotide excision repair
kab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B7C62_26540
03410 Base excision repair
B7C62_26540
03420 Nucleotide excision repair
B7C62_26540
03430 Mismatch repair
B7C62_26540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kab03032
]
B7C62_26540
03400 DNA repair and recombination proteins [BR:
kab03400
]
B7C62_26540
Enzymes [BR:
kab01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
B7C62_26540
DNA replication proteins [BR:
kab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B7C62_26540
DNA repair and recombination proteins [BR:
kab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
B7C62_26540
NER (nucleotide excision repair)
GGR (global genome repair) factors
B7C62_26540
MMR (mismatch excision repair)
DNA ligase
B7C62_26540
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B7C62_26540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH_5
HHH
zf-IS66
Zn_ribbon_TFIIB
ILEI
Motif
Other DBs
NCBI-ProteinID:
ARF75413
UniProt:
A0ABC8BYH9
LinkDB
All DBs
Position
5964605..5966872
Genome browser
AA seq
755 aa
AA seq
DB search
MAGEERVEQESSVPAGVRETHALLAEQIEEHRFRYYVKDQPVVSDAEFDRLMRSLEALEE
EYPQLRTPDSPTQKVAGPYITEFTSVEHRERMLSLDNAFDDEELAAWAERVAKDVGTPDH
HFLCELKVDGLAVNLTYEHGRLTRAATRGDGRTGEDITPNVRTIAEIPHRLQGENIPALV
EIRGEVFFPMEGFEELNARLVAAEDKPFANPRNAAAGSLRQKDPKVTATRPLHMVVHGIG
AHEGLSIDRLSQAYGLLHSWGLPTARHNKVVDSIEGVREFIAHFGEHRHSVEHEIDGVVV
KLDEIPLQGRLGSTSRAPRWAIAWKYAPEEVNTKLVNIRVGVGRTGRVTPYAQVEPVEVA
GSEVEFATLHNQEVVKAKGVLIGDTVVLRKAGDVIPEILGPVVDLRDGTEKPFEMPTHCP
ECGTELRPMKEADIDLRCPNARTCPAQLRERVFYLAGRKSLDIDHFGYVAAAALTRPLEP
AEPVLKDESGLFDLTIEQLLPIRAYVLDQDSGLPKRDPKTGEEKIATVFANKQGEPKKNA
VAMLEGIAAAKEAPLARILTGLSIRHVGPVAAQELARQFRSIDRIDEATEQELADADGVG
PIIAASVKQWFAEDWHREILRKWRAAGVRMADEGSDEDEGPRPLDGLTVVVTGTLASHTR
DGAKEALQSLGAKVTGSVSKKTAFVVVGDNPGSKYDKAMQLKVPVLDEAGFAVLLEQGPD
AAREAALPVPGEEEAEAEMETGAEAGGTEPGAASE
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgaagagcgggtggagcaggagagttcggttccggcgggcgtgcgggagacg
cacgcgctgctggccgagcagatcgaggagcaccgcttccggtattacgtgaaggaccag
ccggtcgtcagcgacgccgagttcgaccggctgatgcgctccctggaagcgctggaggag
gagtatccccagctccggacgccggactccccgacgcagaaggtggcggggccctacatc
acggagttcacctccgtcgagcaccgcgagcgcatgctctccctggacaacgccttcgac
gacgaggagctggccgcctgggcggagcgcgtcgccaaggacgtcggcacgcccgaccac
cacttcctgtgcgagctcaaggtggacgggctcgccgtcaacctcacctacgagcacggc
cggctgacccgggcggcgacccggggcgacggccgtaccggcgaggacatcacccccaac
gtccgcaccatcgcggagatcccgcaccggctccagggggagaacatccccgcgctggtc
gagatccggggcgaggtcttcttcccgatggaaggcttcgaggagctgaacgcccggctg
gtggccgccgaggacaagccgttcgccaacccgcgcaacgcggcggccggctcgctgcgc
cagaaggaccccaaggtcaccgccacccgcccgctgcacatggtggtgcacggcatcggc
gcccacgagggcctgagcatcgaccgcctctcccaggcgtacgggctcctccactcctgg
ggcctgcccaccgcccggcacaacaaggtcgtcgactccatcgaaggcgtacgggagttc
atcgcgcacttcggcgagcaccggcactccgtggagcacgagatcgacggggtcgtcgtc
aagctcgacgagatcccgctccaggggcgcctgggctccacctcgcgcgccccgcgctgg
gccatcgcctggaagtacgcccccgaagaggtcaacaccaagctggtcaacatccgcgtc
ggcgtcggccgcaccggccgcgtcacgccgtacgcccaggtcgagccggtcgaagtggcc
ggttccgaggtcgagttcgccaccctccacaaccaggaggtggtcaaggccaagggcgtc
ctgatcggcgacaccgtggtcctgcgcaaggcgggcgatgtcatcccggagatcctcggc
ccggtggtcgatctgcgcgacggcaccgagaagccgttcgagatgccgacgcactgcccc
gagtgcggtacggagctgcgcccgatgaaggaggccgacatcgacctccgctgccccaac
gcccgcacctgtcccgcccagttgcgcgagcgggtcttctatctcgccgggcgcaagagc
ctggacatcgaccacttcggctatgtggccgccgccgccctcacccggcccctggagccc
gccgagccggtcctgaaggacgagagcggcctgttcgacctcaccatcgagcagttgctg
ccgatccgggcgtacgtcctcgaccaggacagcgggctgcccaagcgcgacccgaagacc
ggcgaggagaagatcgcgacggtcttcgccaacaagcagggtgagccgaagaagaacgcg
gtggccatgctggagggcatcgccgccgcgaaggaggcgccgctggcccgtatcctcacc
gggctctccatccggcacgtcggaccggtcgccgcccaggagctggcccgccagttccgc
tccatcgaccgcatcgacgaggccaccgagcaggagctggccgacgcggacggcgtcggc
cccatcatcgccgcctccgtgaagcagtggttcgccgaggactggcaccgcgagatcctg
cgcaagtggcgtgcggccggggtcaggatggccgacgagggatcggacgaggacgagggc
ccccgccccctcgacggcctcaccgtcgtcgtcaccggcaccctcgcctcccacacccgg
gacggcgccaaggaggcgctccagagcctcggggcgaaggtcaccggatcggtgtcgaag
aagaccgcgttcgtggtcgtcggcgacaaccccggctccaagtacgacaaggccatgcag
ctgaaggtccccgtgctggacgaggccggtttcgccgtgctgctcgagcagggccccgac
gcggcacgggaggcggccctgcccgtaccgggggaggaagaggcggaagcggagatggag
accggggcggaggcggggggaacggagccgggggccgcatcggagtag
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