KEGG   Kitasatospora albolonga: B7C62_31815
Entry
B7C62_31815       CDS       T05009                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
kab  Kitasatospora albolonga
Pathway
kab03030  DNA replication
kab03410  Base excision repair
kab03420  Nucleotide excision repair
kab03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:kab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B7C62_31815
   03410 Base excision repair
    B7C62_31815
   03420 Nucleotide excision repair
    B7C62_31815
   03430 Mismatch repair
    B7C62_31815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kab03032]
    B7C62_31815
   03400 DNA repair and recombination proteins [BR:kab03400]
    B7C62_31815
Enzymes [BR:kab01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     B7C62_31815
DNA replication proteins [BR:kab03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     B7C62_31815
DNA repair and recombination proteins [BR:kab03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     B7C62_31815
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B7C62_31815
   MMR (mismatch excision repair)
    DNA ligase
     B7C62_31815
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      B7C62_31815
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_5 HHH_2 BRCT PTCB-BRCT Nlig-Ia HHH DNA_ligase_ZBD BRCT_2 DUF7575
Other DBs
NCBI-ProteinID: ARF76361
UniProt: A0ABC8C1L6
LinkDB
Position
7238751..7241147
AA seq 798 aa
MVGGRMVVMTNSAAVLADAAAYAAAVEEASQAAAAYYATGESTLDDDAYDRLARGIAAYE
ADHPDEIHESSPTGKVAGGAAVGDVPHTVPMLSLDNVFSAEQFVSWTASLERRIGRPVAA
WSVEPKLDGLAVAARYREGRLERLITRGDGAAGEDVSHAAAAVVGLPERLAAPVTIEVRG
EILMTNEQFEQGNAIRTEHGGAPFANPRNGAAGTLRAKDRAYRVETTFFAYGALPLADSG
ELAETLTELPHSEILAYVAGLGVHTAAATEVAPVRVTTAEEVQARVDEIGALRAVLPFGI
DGIVIKADLAADQREAGSGTRAPRWAIAYKLPAVEKITRLLSVEWNVGRTGIIAPRAVLE
PVEIDGSTVGYATLHNPADITRRDLRLGDQVMVYKAGDIIPRIEAPVAHLRTGDETPIEF
PESCPQCGSEIDASEQRWRCTRGRDCRLVASVSYAAGRDQLDIEGLGATRVVQLVDAGLV
TDFADLFTLEREQLLALDRMGETSTDNLLAAIETARSRPLSRVFCALGVRGTGRSMSRRI
ARFFATMDHIVAADAESLQRVDGIGKEKAAAVVAELVELAPLIEKLVRAGVTMTEPGATP
PPEPGTEEQEGAGAGAELPLAGMKVVVTGAMTGALEKLSRNQMNELIERAGGKSSSSVSA
RTSLLVAGEKAGSKRTKAEELGLRIVAPEEFAELLADFLTGKAAEVGEVAEAMETVSVVA
AVVTAEAAAGTAAAAVGAAEAVEGAVVVEGAVVAGSATVVDEAVVVEGAVVVEEAEAVKD
AEVVKDAEVVKDAEVVKV
NT seq 2397 nt   +upstreamnt  +downstreamnt
gtggtgggcggcaggatggtggtcatgacgaactcagccgctgtgctcgccgatgccgcc
gcctatgccgccgcggtcgaagaggcatcccaggccgccgccgcgtactacgccacgggc
gagagcacgctcgacgacgacgcgtacgaccggctggcgcgggggatcgccgcgtacgag
gcggaccatcccgacgagatacacgagtcatcaccgacggggaaggtggcgggcggggcc
gccgtcggcgatgttccgcacacggtgccgatgctctcgctggacaacgtgttctcggcc
gagcagttcgtgagctggaccgcgtcgctggagcggcggatcggcagaccggtcgccgcc
tggagcgtggagccgaagctcgacggcctcgcggtcgccgcccgttaccgggaaggccgc
ctggagcggctgatcacccggggcgacggcgcggcgggcgaggacgtatcgcatgcggcc
gccgcggtcgtcggactgcccgagcggctggcggccccggtcaccatcgaggtgcgcggc
gaaatactcatgacgaacgagcagttcgagcagggcaacgcgatccgtacggagcacggc
ggcgcccccttcgccaacccgcgcaacggggcggcgggcaccctgcgcgccaaggaccgg
gcgtaccgcgtggagacgaccttcttcgcctacggggcactgccgctcgccgactccggt
gagctcgccgagaccctcaccgagctgccccacagcgagatcctcgcgtatgtcgccggg
ctcggcgtgcacacggccgcggccacggaggtggcaccggtccgggtgaccacggcggag
gaggtgcaggcccgggtggacgagatcggcgccctgcgtgccgtgctgccgttcggtatc
gacgggatcgtgatcaaggcggacctcgccgccgaccagcgcgaagccgggtccgggacc
cgggcgccgcgctgggccatcgcctacaagctccccgccgtcgagaagatcacccgcctg
ctctccgtcgagtggaacgtgggacgcacggggatcatcgcgccgcgtgccgtcctggag
cccgtcgagatcgacggatcgaccgtcgggtacgccaccctgcacaacccggcggacatc
acccgccgcgatctgcgcctgggcgaccaggtcatggtctacaaggcgggtgacatcatc
ccgcgcatcgaggcgcccgtcgcccatctgcgtacgggggacgagacgccgatcgagttc
ccggagagctgcccgcagtgcggctccgagatcgacgcgagcgagcagcgctggcgctgc
acccggggccgtgactgccggctggtcgcctccgtctcgtacgccgccgggcgggaccag
ctcgacatcgagggcctcggggccacccgggtcgtccagctcgtggacgcgggcctcgtc
acggacttcgccgatctgttcaccctggagcgggagcagctgctcgccctggaccggatg
ggcgagacctccaccgacaatctcctggcggccatcgagaccgcccgctcgcgcccgctg
tcccgggtcttctgtgccctgggcgtacgggggacggggcgctccatgtcccgcaggatc
gcgcggttcttcgcgaccatggaccacatcgtcgccgccgacgccgagtcgctccagcgg
gtcgacggcatcggcaaggagaaggccgcggcggtggtcgccgagctggtggagctggcc
ccgctgatcgagaagctcgtccgggccggggtgacgatgacggagccgggtgccaccccg
cccccggagcccggcacggaggagcaggagggcgcgggggccggtgcggagctgccgctg
gcggggatgaaggtggtggtcacgggggcgatgaccggggcgctggagaagctgtcgcgc
aatcagatgaacgagctgatcgagcgggcgggcgggaagtcgtcctccagcgtctccgcg
cgcaccagcctgctggtggcgggggagaaggccgggtcgaagcggaccaaggcggaggag
ctgggcctcaggatcgtggcgccggaggagttcgcggagctcctcgcggacttcctcacg
gggaaggccgccgaggtcggggaggtcgcggaggccatggagacggtgagcgtggtggcg
gcggtcgtgactgccgaagcggcggccggtacggcagcggcagccgtgggggcggcggaa
gctgtggagggcgcggtggtcgtggagggcgcggtggtcgcggggagtgcgacggttgtg
gacgaggcggtggtcgtggagggcgcggtggtggtcgaggaggcggaggccgtgaaggac
gctgaggtggtgaaggacgctgaggtggtgaaggacgctgaggtcgtgaaggtctga

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