Kordia antarctica: IMCC3317_09410
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Entry
IMCC3317_09410 CDS
T06371
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
kan
Kordia antarctica
Pathway
kan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IMCC3317_09410 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kan03400
]
IMCC3317_09410 (nth)
Enzymes [BR:
kan01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IMCC3317_09410 (nth)
DNA repair and recombination proteins [BR:
kan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IMCC3317_09410 (nth)
Prokaryotic type
IMCC3317_09410 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RIMC1
Motif
Other DBs
NCBI-ProteinID:
QHI35595
UniProt:
A0A7L4ZG41
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All DBs
Position
1158820..1159485
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AA seq
221 aa
AA seq
DB search
MTKQEKVQFVIDTLQRIYPEIPVPLDHKDPYTLLIAVLMSAQSTDVRVNKITPLLFAKAD
NPYDMIKLSVEEIREIIKPVGLSPMKAKGIYGLSHILIDKHDGKVPQNLEDLEELPAVGH
KTASVVISQAFGIPAFPVDTHIHRLMYRWNLTNGKNVVQTEKDAKRLFPEEIWNDLHLQI
IWYGREYCQARGWNLDNDIITKTIGRKSVLDTYYKNKKTRS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacaagaaaaggttcagtttgttattgatacgcttcaaagaatatatcctgag
attcctgttccgctcgatcataaagatccgtatacgttattaattgccgttttaatgtct
gcgcaaagtacagatgtgcgcgtgaataagattacacctttgttgtttgcaaaagcggat
aatccgtatgatatgattaaactttcagtagaagaaatcagagaaatcataaaaccagta
ggtttatcgcctatgaaagcgaaagggatttacggtttgtcacacattcttattgacaag
catgatggaaaagttcctcaaaatttagaagatttggaagaattgccagctgtcggacat
aaaacggcaagtgttgtgataagtcaagcatttggaattcctgcgtttcctgttgatacg
cacattcatagattgatgtatcgttggaatttgaccaatggaaaaaatgtagttcagaca
gaaaaagacgcaaaacgactgtttccagaggaaatatggaacgatttacatttgcaaatt
atatggtacggaagagaatattgccaagcacgcggttggaatttggacaacgatattatt
accaaaactattggtagaaaatcggtgcttgatacgtattataaaaataaaaagactcgc
agctaa
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