Candidatus Kaistella beijingensis: J4771_09445
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Entry
J4771_09445 CDS
T07870
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
kbe
Candidatus Kaistella beijingensis
Pathway
kbe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4771_09445 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kbe03400
]
J4771_09445 (nth)
Enzymes [BR:
kbe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J4771_09445 (nth)
DNA repair and recombination proteins [BR:
kbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J4771_09445 (nth)
Prokaryotic type
J4771_09445 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
DUF3349
RecR_HhH
Ogg-HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UBB89092
LinkDB
All DBs
Position
complement(2033183..2033797)
Genome browser
AA seq
204 aa
AA seq
DB search
MTKKQRAETILRELEKLYPEVPIPLNHRDAFTLLVAVALSAQTTDKKVNEITPKLFEAAD
TPFKMAKLEFEEIRDLIKEIGLTNQKAKNLKRMSEILVEKHNGIVPQTFEELEELPGVGH
KTASVVMSQAFGFPAFPVDTHIHRLMKQWKLTEGKNVVQTENDAKKLFPKETWNKVHLQI
IFYGREYSPARGNQERDFLTKMLF
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaaaacaaagagccgaaaccattttgcgtgaactcgaaaaactatatcccgaa
gttccgattcctttaaatcacagagatgctttcacacttcttgttgcagtagcactatct
gcacaaaccaccgataaaaaggtgaacgaaatcaccccaaaactttttgaagcagccgac
acgccttttaaaatggctaaacttgaatttgaagaaatccgagacctcatcaaagaaatc
ggtttaacgaatcaaaaggcaaaaaatctgaaaagaatgtctgaaattttggtcgaaaaa
cacaacggcatcgttccccaaactttcgaagaattggaagaacttcccggagttgggcac
aaaactgcaagtgtggtgatgagtcaagctttcggatttcccgcatttcctgtcgatacc
cacattcaccgacttatgaaacaatggaaattgacagaaggaaaaaacgtggttcaaaca
gaaaacgacgccaaaaaattgttcccaaaagaaacatggaacaaagttcatttacaaatt
attttctacggcagggaatattcacccgcaagaggaaatcaggaaagggattttttgacg
aagatgttgttttag
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