Kitasatospora camelliae: ABWK59_22460
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Entry
ABWK59_22460 CDS
T11032
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
kcm Kitasatospora camelliae
Pathway
kcm03030
DNA replication
kcm03410
Base excision repair
kcm03420
Nucleotide excision repair
kcm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABWK59_22460 (ligA)
03410 Base excision repair
ABWK59_22460 (ligA)
03420 Nucleotide excision repair
ABWK59_22460 (ligA)
03430 Mismatch repair
ABWK59_22460 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kcm03032
]
ABWK59_22460 (ligA)
03400 DNA repair and recombination proteins [BR:
kcm03400
]
ABWK59_22460 (ligA)
Enzymes [BR:
kcm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ABWK59_22460 (ligA)
DNA replication proteins [BR:
kcm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABWK59_22460 (ligA)
DNA repair and recombination proteins [BR:
kcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ABWK59_22460 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABWK59_22460 (ligA)
MMR (mismatch excision repair)
DNA ligase
ABWK59_22460 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABWK59_22460 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
XCM81477
UniProt:
A0AAU8K051
LinkDB
All DBs
Position
unmamed1:4970700..4972982
Genome browser
AA seq
760 aa
AA seq
DB search
MAVEGWEDVPAEVRRRHVELAAEIEDHRARYYEQDAPTISDAEFDRLMRELEGIEAEHPA
LVTPDSPTQKVGGAAVGLFAEVEHRERLLSLDNAMDEEELAAWAERVATELSGIDYHYLC
ELKVDGLAVNLTYERGRLVQAATRGDGRVGEDITANVRTIKEIPHQLQGEDIPELVEIRG
EVYFPTEAFDALNASFAEENERRRQENEERAREGKRPRAMIRLFMNPRNAAAGSLRQKDP
LITASRPLHMVVHGIGARVGFDIDCQSHAYDLLRAWGLPTARHNRVVGTLEEVRAFIKQY
GEQRHSVEHEIDGVVVKVDEIALQGRLGATSKSPRWAIAWKYPPEEVTAKLASIKVGIGR
TGRATPYAVLAEPVKVAGSMVQYATLHNQQVVKAKGVLLGDTVVLRKAGDVIPEILGPVE
DLRDGTEREFVMPTHCHECGTELRPMSEGDIDLRCPNAQYCPAQVRERIAYLGGRESLDV
EGLGYVAATALTQPLEPAEAPVKNEGDIFGLTEEQLLPIKVLVRDQKTGMPKLDDRTGKE
KEVPFFATTKGEPKKSLALLLENLDKAKDRPLWRYVNGLSIRHVGPVAAQALAREFRDLD
RIFAASEEELAAAEGVGPTIAKAIKEWYAEEWHREILEKWRAAGVRFTEAGAEEEGERPL
EGLTVVVTGTLAGHTRDGAKEALTSRGAKVTGSVSKKTHFVVVGDNPGSKYDKAVQLGVP
VLDDAGFAVLLDRGADAARAHLGLAPAGEAGAPEEAGPAA
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
gtggcggtcgagggctgggaggacgtacccgcggaggtccggaggcggcacgtcgagctg
gcggccgagatcgaggaccaccgcgcccggtactacgagcaggacgcgccgaccatcagc
gacgccgagttcgaccggctgatgcgggagttggaggggatcgaggccgagcacccggct
ctggtcacccccgactcgcccacccagaaggtcggcggcgcggccgtcggcctgttcgcc
gaggtcgagcaccgcgagcggctgctcagcctcgacaacgccatggacgaggaggagttg
gccgcctgggccgagcgggtcgccaccgagctgtcgggcatcgactaccactacctctgc
gagctcaaggtggacggcctcgccgtcaacctcacctacgagcgcggccggttggtccag
gccgccacccgcggcgacggccgggtcggcgaggacatcaccgccaacgtccgcaccatc
aaggagatcccgcaccagctccagggcgaggacatccccgaactggtcgagatccgcggc
gaggtgtacttcccgaccgaggccttcgacgccctcaacgcctccttcgcggaggagaac
gagcgccgccgccaggagaacgaggagcgcgcccgggagggcaagcggccccgggcgatg
atccggctgttcatgaacccgcggaacgcggccgccggttcgctgcgccagaaggacccg
ctgatcaccgcctcccgcccgctgcacatggtggtgcacggcatcggcgcccgggtcggt
ttcgacatcgactgccagtcgcacgcctacgacctgctgcgcgcctggggcctgcccacc
gcccggcacaaccgggtggtcggcacgctggaggaggtccgcgccttcatcaagcagtac
ggcgagcagcggcactccgtcgagcacgagatcgacggcgtggtggtcaaggtggacgag
atcgccctgcagggccggctcggcgccacctccaagtccccgcgctgggcgatcgcctgg
aagtacccgccggaggaggtcaccgcgaagctggcctcgatcaaggtcggcatcggccgc
accggccgggccaccccgtacgcggtgctggccgagccggtgaaggtggccggctcgatg
gtccagtacgcgacgctgcacaaccagcaggtggtcaaggccaagggcgtgctgctcggc
gacaccgtggtgctgcgcaaggccggcgacgtcatcccggagatcctcggcccggtggag
gatctgcgggacggcaccgagcgggagttcgtgatgccgacgcactgccacgagtgcggc
accgagctgcggccgatgtccgagggcgacatcgacctgcgctgccccaacgcccagtac
tgcccggcccaggtgcgcgagcggatcgcgtacctcggcggccgcgagtcgctggacgtc
gagggcctcggctacgtcgcggccaccgcgctcacccagccgctggagcccgccgaggcc
ccggtgaagaacgagggggacatcttcggcctgaccgaggagcagctgctgccgatcaag
gtgctggtccgcgaccagaagaccggcatgccgaagctggacgaccggacgggcaaggag
aaagaggtccccttcttcgccaccaccaagggcgagcccaagaagtccctggccctgctc
ctggagaacctggacaaggccaaggaccgcccgctctggcggtacgtcaacggcctgtcg
atccgccacgtcggcccggtcgccgcccaggcgctggcccgcgagttccgcgacctggac
cggatcttcgccgccagcgaggaggagctggccgccgccgagggcgtcgggccgaccatc
gccaaggcgatcaaggagtggtacgccgaggagtggcaccgcgagatcctggagaagtgg
cgggccgccggggtgcggttcaccgaggccggggccgaggaggagggcgagcgcccgctg
gagggcctgaccgtggtggtcaccggcaccctcgccggccacacccgggacggcgccaag
gaggcgctcacctcgcgtggggccaaggtcaccggctcggtgtccaagaagacccacttc
gtggtggtcggcgacaaccccggctccaagtacgacaaggccgtccagctcggggtgccg
gtgctggacgacgcgggcttcgccgtgctgctcgaccggggcgccgacgccgcccgggcc
cacctcggcctcgccccggcgggggaggcgggggcgcccgaggaggccggccccgcggcc
tga
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