Dokdonia sp. 4H-3-7-5: Krodi_0404
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Entry
Krodi_0404 CDS
T01484
Name
(GenBank) catalytic domain-containing protein of components of various dehydrogenase complexes
KO
K00658
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:
2.3.1.61
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi00020
Citrate cycle (TCA cycle)
kdi00310
Lysine degradation
kdi00380
Tryptophan metabolism
kdi00785
Lipoic acid metabolism
kdi01100
Metabolic pathways
kdi01110
Biosynthesis of secondary metabolites
kdi01120
Microbial metabolism in diverse environments
kdi01200
Carbon metabolism
kdi01210
2-Oxocarboxylic acid metabolism
Module
kdi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
kdi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Krodi_0404
09105 Amino acid metabolism
00310 Lysine degradation
Krodi_0404
00380 Tryptophan metabolism
Krodi_0404
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Krodi_0404
Enzymes [BR:
kdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
Krodi_0404
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Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
E3_binding
GCV_H
Motif
Other DBs
NCBI-ProteinID:
AEE18390
UniProt:
F4AYC3
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Position
complement(468437..469747)
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AA seq
436 aa
AA seq
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MARFELKLPKMGESVAEATLTTWLKEVGDTIEADEPVLEIATDKVDSEVPSEVDGILIEK
LFEVDDVVEVGQTIAIIETEGEGSGDAAPAPAQKETKEEEVAVAAVAQTVTAAKDAVAAP
VSSGDRFYSPLVRNMAKEEGIDQAELDAIAGTGKDGRVTKDDMVTYLSTRGTAPAKPAAQ
KQAPAAKAAPAVKVAPVSVNGEDEIIEMTRMGKLISHHMVASVQTSAHVQSFIEADVTNI
WNWRKKHKDSFKAKEGQNLTFTPIFMEAVAKAIRDFPMINIAVDGDKIIKRKNINLGMAA
ALPDGNLIVPVIKNADQLNLVGMAKSVNDLAGRARDGKLKPDDTAGGTYTVTNVGTFGSI
MGTPIINQPQVAILALGAIRKVPAVIETPDGDFIGIRMKMYLSHSYDHRVVNGALGGQFV
KRVAEYLEGFDVNREV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcaagatttgaattaaagctaccaaaaatgggagaaagtgttgcagaagcaacgctt
acaacttggttaaaagaagtaggagatactatagaggcagatgagcctgtactagagatc
gctacagataaggtagatagtgaagttcctagtgaagtagacggtattttaatagaaaaa
ctgtttgaggtagatgatgttgttgaggtagggcagactattgctattatagaaaccgaa
ggtgaaggaagcggtgacgctgcgccagcgccagctcaaaaagaaactaaagaagaagag
gttgcagttgctgcagtcgctcaaactgtaactgctgcaaaagacgcagtagctgctcct
gtaagttctggagaccgtttttactcgccactggtgcgtaacatggctaaggaagaaggt
attgatcaagcagagcttgatgcaatcgcaggtacaggtaaagatggtagagtgactaag
gatgatatggtaacatatctttctacacgtggtacagctccggctaagccagctgcacaa
aaacaagcgcctgctgctaaggctgctcctgcagtaaaagttgcaccagtaagtgtaaat
ggtgaagatgagatcatagaaatgacacgtatgggcaagctcatatcgcatcacatggta
gcatctgtacaaacaagtgcacacgttcaatcatttattgaggcagatgtaacaaacatc
tggaactggagaaagaaacacaaggatagctttaaagcaaaagaaggtcagaatttaacc
tttactcctatatttatggaggctgtagcaaaagctatacgtgatttccctatgattaac
attgccgtagatggtgataagatcataaaacgtaaaaatataaaccttggtatggcagca
gctttaccagatggtaaccttatagtacctgtaataaaaaatgcagaccagcttaatctt
gtagggatggcaaagtctgttaatgatcttgcgggacgtgctagagatggaaaattaaaa
ccagatgatactgctggaggaacgtatacggtaacaaatgtaggaacctttggatctatc
atgggaactcctattatcaatcagccgcaagttgcaattcttgcgctaggagccatacgc
aaagtacctgcagtgatagaaactccagacggagattttatcgggatacgtatgaaaatg
tacctttcacactcttatgaccaccgtgtggtaaatggagcactgggcggacagtttgta
aaacgtgttgctgagtatctggaaggatttgatgtaaatcgcgaagtataa
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