Dokdonia sp. 4H-3-7-5: Krodi_0432 Help Entry Krodi_0432        CDS       T01484                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism kdi  Dokdonia sp. 4H-3-7-5 Pathway kdi03030   DNA replication kdi03410   Base excision repair kdi03420   Nucleotide excision repair kdi03430   Mismatch repair Brite KEGG Orthology (KO) [BR:kdi00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Krodi_0432    03410 Base excision repair     Krodi_0432    03420 Nucleotide excision repair     Krodi_0432    03430 Mismatch repair     Krodi_0432  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:kdi03032]     Krodi_0432    03400 DNA repair and recombination proteins [BR:kdi03400]     Krodi_0432 Enzymes [BR:kdi01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Krodi_0432 DNA replication proteins [BR:kdi03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Krodi_0432 DNA repair and recombination proteins [BR:kdi03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Krodi_0432    NER (nucleotide excision repair)     GGR (global genome repair) factors      Krodi_0432    MMR (mismatch excision repair)     DNA ligase      Krodi_0432   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Krodi_0432 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT BRCT_2 HHH Nlig-Ia Auto_anti-p27 5_3_exonuc PADR1_N Zn_ribbon_Top1 Motif Other DBs NCBI-ProteinID:  AEE18418 LinkDB All DBs Position complement(495572..497566) Genome browser AA seq 664 aa AA seqDB search MTIEEQILALRNELQSHNHSYYVLDTPTISDFDFDQKLKQLEALEAAHPEFDDPNSPTHR VGGAVTKNFETIVHENRMYSLDNSYSKEDLEDWEARVKKMVDGEVNYTCELKYDGASISL TYENGELLKAVTRGDGLQGDDVTTNIKTIKSVPLKLKGDYPEKFDIRGEIVLPWEGFHAM NAEREELGFELYRNPRNTASGSLKLQDSAEVARRPLQCLLYNITGNNLGIATQMDSLQKA RDWGFRVPEAAKLAKNIDEVLEFINHWDVARRDLPYETDGVVVKVNGLQQQEELGYTAKA PRWAMAYKFKAEQVSTRLREITYQVGRTGAITPVANLEPVELAGTTVKRASLHNADQIER LDIREGDEVFVEKGGEIIPKIIAVDLTKRPADSEPTTYITECPECSTPLVRKEGEAQHYC PNDMGCPTQIIGRIQHYISRKAMDIDGLGGETVALLVNEGLIVNYADLYELTVAQLLPLE RMAQKSAENLVSGVQASVQIPFEKVLFGLGIRYVGETVAKKLAKHYKSIDAIISATEEEL VAVDEIGSKIAESVMAFFAKAEHITLIERLRSYGVQLEISAEKLANQSDKLAGYIFVVSG VFEMPRNELKKLIEDNGGKVSSSISSKTTYVVAGDKMGPSKLEKAESLGVTIISEEEFLN LVIG NT seq 1995 nt NT seq  +upstreamnt  +downstreamnt atgacaatagaagagcaaatcctcgctttacgcaacgaactacaatcacataatcatagc tattatgtgctagatacaccaacgatatcagattttgactttgatcaaaaactgaagcaa ctggaagcactagaagctgctcatccggaatttgacgaccctaactcgcctacgcatcgt gtaggtggagcggtgactaaaaattttgagactattgtacatgagaacagaatgtactct ctggataactcatattcaaaagaagatcttgaggattgggaagcacgcgtaaagaaaatg gtagatggagaggttaattatacctgcgaacttaaatatgacggagcctcaataagtctt acttatgaaaatggtgagttgcttaaagcggttactcgaggagatggtttgcaaggagat gatgtgactacaaatattaaaacgataaagtcggttcctttaaaactgaaaggtgattat cctgaaaaatttgatatacgaggggagattgtattgccatgggaaggttttcatgccatg aatgcagagcgtgaagagctaggttttgagctctatcgcaatccaagaaatacagccagc ggatctttaaaattacaagatagtgctgaggttgctagaagaccactgcaatgccttttg tataatattacaggaaataatctaggtattgctacccaaatggatagcttacagaaggct cgcgattggggtttccgcgttcctgaggcggcaaaactggcaaagaatattgatgaggta ttggaatttatcaatcactgggatgtggcaaggcgtgacttaccttatgagacagatggt gttgtggtaaaagtcaacggattacaacaacaagaagaactaggttatacagcaaaggct ccgcgatgggcaatggcgtataaatttaaagcagaacaagtttctacacgcttacgcgaa ataacataccaagtaggtcgcacaggagccatcacaccagtcgcaaaccttgaacctgtt gaacttgctggaacgaccgtgaagcgagctagtttgcataatgcagatcagatagagcga ctcgatatacgagaaggtgatgaggtgtttgtagaaaaaggcggcgagattattccaaaa attatagcagtagatcttacaaagcgcccagcagattctgaacctacaacatatattact gagtgtccagaatgtagcacgccgttagtgcgtaaagaaggcgaggcacagcactattgc ccgaatgacatgggctgtcccactcaaattataggtagaatacagcattacatctctaga aaggcaatggatattgatggtctaggaggggaaaccgtagcgctcttagtaaacgagggg ctgattgtaaattatgcagatctatatgagcttactgtagcgcaattattaccactagag cgtatggctcaaaaaagtgccgaaaatctagtaagcggagtgcaagcctcggtgcagatt ccttttgagaaggtgttgtttggtctaggaattaggtatgtaggtgagaccgtagccaag aaacttgcaaaacattacaaatctatagacgctattatttcggcaacagaggaagagctg gttgcggtggacgaaataggaagtaagattgcagaaagtgtaatggcatttttcgcgaaa gcggaacatattacactcatagagcgtttaagatcttacggagtacaattagaaatttct gcagagaaacttgccaatcaatctgacaaactagcgggatacatatttgtagtgtctggt gtttttgaaatgcctcgcaacgaattgaaaaagttaatagaagataatggcggtaaagtg tctagttctatttctagtaaaacaacctacgttgtggcaggagataagatgggaccaagt aagttggagaaagcagaaagcttaggagtaacaatcatatctgaagaagaattcttaaat ttagttattggataa

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