KEGG   Dokdonia sp. 4H-3-7-5: Krodi_2687
Entry
Krodi_2687        CDS       T01484                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
kdi  Dokdonia sp. 4H-3-7-5
Pathway
kdi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:kdi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Krodi_2687
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kdi03400]
    Krodi_2687
Enzymes [BR:kdi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Krodi_2687
DNA repair and recombination proteins [BR:kdi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Krodi_2687
 Prokaryotic type
     Krodi_2687
SSDB
Motif
Pfam: HhH-GPD HHH
Other DBs
NCBI-ProteinID: AEE20663
UniProt: F4B351
LinkDB
Position
3025228..3026034
AA seq 268 aa
MLSRKRKLSHLVKALNYKVTSSRNYNKGIRLSFMDYTIKNNYAHHMTKQEKVDFTIKTLQ
ELYPQIPIPLDHKDPYTLLIAVLMSAQSTDVRVNQITPLLFEVADNPYDMIKLTVEDIRD
IIKPVGLSPMKAKGIHGLSHMLIDKYDGVVPASIEKLTEFPAVGHKTASVVVSQAFGIPA
FPVDTHIHRLMYRWGFTNGKNVVQTEKDAKRLFPEHVWNDLHLQIIWYGRQYSPARGWDL
EKDIITKTIGRKTVIADYEKMMAKRKKK
NT seq 807 nt   +upstreamnt  +downstreamnt
atgctttcgcgaaagcgtaaactatcacatctagtgaaagcattgaattataaagttacg
agttctcgcaattacaataaaggaatacgtttaagctttatggattacaccataaagaat
aattatgcacaccatatgactaaacaagaaaaggtagacttcacgataaaaacgttacaa
gaattatatcctcagatacctattccattagatcacaaagatccgtatacacttcttatt
gctgtgttaatgagtgctcagagcacagatgttagagttaatcaaatcactccccttcta
tttgaagtggcagataatccgtatgatatgatcaagctcacagtagaagatatacgagat
atcataaagcctgtaggactatcacctatgaaagcaaaaggcattcatggcttgtcacat
atgctcatagataagtatgatggcgtggtacctgccagcatagagaagcttacagagttc
ccagcagtgggccataaaacagctagtgttgtggtgtctcaagcttttggcattcctgca
tttcctgtagatacgcacatacatagattaatgtatcgctggggcttcacaaatggtaag
aatgtggtacaaacagaaaaagatgcaaagcgtttatttccagagcatgtatggaatgat
cttcacttgcaaattatatggtatggtcgccagtactcaccagcaagaggctgggatcta
gaaaaagacattattacaaaaaccataggtcgcaagacagtaatagccgactatgagaaa
atgatggcaaaaaggaagaaaaaataa

DBGET integrated database retrieval system