KEGG   Kwoniella dejecticola: 28970797
Entry
28970797          CDS       T10965                                 
Symbol
I303_108576
Name
(RefSeq) uncharacterized protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
kdj  Kwoniella dejecticola
Pathway
kdj03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:kdj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    28970797 (I303_108576)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kdj03400]
    28970797 (I303_108576)
Enzymes [BR:kdj01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     28970797 (I303_108576)
DNA repair and recombination proteins [BR:kdj03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     28970797 (I303_108576)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 28970797
NCBI-ProteinID: XP_065825941
UniProt: A0AAJ8KWZ2
LinkDB
Position
11:join(1206619..1206638,1206698..1207037,1207118..1207576,1207647..1207762,1207827..1207925,1207979..1208221,1208290..1208437,1208501..1208560,1208632..1208674,1208731..1208798,1208861..1208948,1209012..1209217,1209294..1209419,1209501..1209567,1209639..1210588)
AA seq 1010 aa
MDIPFESFAKLVYHLGNPPRSPQTATKVSKALAPQKIFQSWLNHLAKPFSPGTGKHLFRL
LFPHEGSRRRYGLKESKLALELERILGVRGLGKWDCVSWEGNDSGTGCLGKEVELAMRDR
SSSSHKSKLTIREVDLLLDELATSSSFSQLSQLPTTFRSPQTILSILYRESGLSPYGLCV
LTQIILRDLRPLLNPLPKLPIRNPTTMLRMKSNTGPDQLTLRDAMITWDKRIWEFYNGGR
GNIDVCADIIESLDNGLQEGIVMTGPLLGTNVKIPKCRKGRSISDALNEFTGTKYGSQAQ
EIWAETKYDGYRLQIHVTCPEGEPSIKIFSKSTRDSTQDRLNTHSIILASLNLPLPGHLP
IHPALEPRIADSPQTPKGKGVSSIILEAEVVPYNESSREGGREPGIEEFWWLGLAGVTTE
AHNQIHDNAFPKRSSRHLCLVFFDILYLNGQSLLHRRYEERRTLLEQTIRPIRGFSRLAE
RTRISLGLNRQTAIQSLEEAFRRSNEHHEEGLVLKASNSTYTNMRWQWVKLKKDYIPNLG
DCIDLVLLGAGWDIDRARELRVDTSVFTTFYLGVLTNAARVTSRKELPHFEILFRVSYGP
DRTQLEYYNECLRYGRWGNKPFDKDDPFKRRLIGLSWTYTLQKGMIPPSVLFEKPLCAEV
MGAGFQKLPGSAYYELRWPRLQKIYEPSERQWVDALSAQDLIKTAHQSLGYNIPATSPYS
PPSGEDSIRAMWRSHSTINLIDKPQSFSPISPTSPISPKAKSPTSPKRVMSEPNLALLRD
THRRPHDDAPTSPLALKGVPFRLPEKEKTDPGEGEAGQNLAALISDNTYASPRTRIASNP
QAHEANERLEVQNLDEPFHEAPPIPRTTASPPRSRPQPLPQVQNPEQNRIILGPPLPLAS
VSAPAPASASAQAPHTPRKSPQRKISQPANISPAKRLISSIDWSTLDVRNHSTPKFKPEF
ERKPRKRAKRIDVKRDKINSRKEEIGNKVVKPLSLRSRIKLASRRIGVRS
NT seq 3033 nt   +upstreamnt  +downstreamnt
atggatattcctttcgagagctttgccaagctggtgtatcatcttgggaaccctccaagg
tcgcctcagacagctaccaaggtgtccaaagcattggcacctcaaaagatcttccaatca
tggcttaatcacctcgccaagccgttttccccgggaactggtaaacaccttttccgactt
ttattcccgcatgaaggctcacggagaaggtatggtctgaaggagtccaagctggctttg
gaactagagaggattttaggtgtgagagggctgggaaaatgggattgcgtttcatgggaa
ggcaatgatagtggaacgggatgtctaggtaaagaagtcgagctggctatgcgagacagg
tcttcgtcgagccataaatcgaaattgaccattcgagaggttgatctactgttagacgag
ctcgcaaccagttcttccttctcccaactatcgcaacttccgactaccttcagatcgccc
cagaccatattgtccatactatatcgagaatctggtctatcaccttacggcttatgcgtc
ttgacccagatcatcttacgagatctgcgtcctctgctcaaccctctacctaaattaccg
atacgtaacccgacaacaatgctgcgtatgaagtctaacaccggccctgatcaactgact
ttacgtgatgcgatgatcacttgggacaagaggatatgggagttctacaatggtgggagg
ggcaatatcgacgtttgtgccgacataattgagagcctcgacaacggactacaagaaggc
atagtcatgactggcccacttctcggcaccaatgtcaagatacccaaatgccggaaaggg
cggtctatctcagatgcactcaatgaattcactggtacgaagtatgggtcacaggcccaa
gagatatgggcggaaacgaaatacgatgggtatcggctgcagatacacgtaacctgtccg
gaaggagagcctagtatcaagatattcagcaagtcgacacgagatagcacacaagacaga
ctgaacacacactcaattatcctggcttcgctcaatcttccgttaccggggcacttgcca
atccatcctgctcttgaacccagaatcgcggactccccacaaacaccgaagggcaaggga
gtatcatcgatcatcctcgaagcggaagtcgtcccgtacaacgagtcttctagggaaggc
ggccgagaaccgggtatcgaggagttctggtggcttggtcttgctggtgtgacgactgaa
gcacataatcagatccatgacaacgcctttccaaaacgctcgagccggcatctttgcctg
gtcttcttcgacatcctatacttgaatggacaaagtcttctccatagacgatacgaagag
cggcggacgttgttggagcagactatcaggcctatccgaggattttcacgcttagccgaa
cggactcgtatatcgttgggactcaatagacaaacagccatacagtccctggaagaagcc
tttcgtcgcagcaacgaacatcacgaagagggcctagtcctcaaagcctcgaactcaaca
tataccaatatgcgctggcagtgggtcaagctcaagaaagattacataccgaacctgggt
gactgtatagatctcgtcttgctaggagcgggctgggacattgatcgtgctcgggagctg
agagtcgatacatcggtcttcacgacattttatcttggagtcttgactaatgctgcccgt
gtgacttcgcggaaagagcttccccactttgagattctgttcagagtctcatatgggcca
gacaggacacagctggagtactataatgagtgcctaaggtatggtagatggggaaataaa
cctttcgacaaagatgatccattcaagcgacggcttatcggattgtcatggacatacacg
ctgcaaaaagggatgatacctccatcagtactgttcgaaaagcctttatgcgcagaagtg
atgggtgctggattccagaaattgcccggatcggcctattacgagctccgttggccccgt
ctgcagaagatatacgaaccgtctgaaagacaatgggtcgatgctttatcagcccaggat
ctaatcaaaacagctcatcaatcattgggatacaatattcccgccacttcaccttattct
ccgccttcaggggaagattcgattcgagcgatgtggagatcgcattcaacgatcaatctg
atcgataaaccgcaatcgttttcccctatttcgcctacttctccaatttctcctaaagca
aaatcacccacttcacctaaacgagtcatgtctgaacccaatctcgctttactgcgagac
acgcatcgtcgacctcacgatgatgctcctacctcgccattggcgctcaaaggcgtgcct
tttcgattgcctgagaaggagaagacagacccgggtgaaggggaagctgggcagaatttg
gctgccctgatatcagacaatacgtatgcttcgcctcgcacgcgcatagcgtccaatcct
caagctcatgaagcgaacgaaaggctggaagtacagaatctcgacgaacctttccatgag
gccccacccatacctcggaccactgcatcgccacctcgatctcgacctcaacctctacct
caagtgcagaatccagagcaaaaccgaattatcctcggacctcccttacccctcgcctcc
gtctcagccccagccccagcatcagcctcagcccaagcaccccatacaccgcgcaaatca
cctcaacgtaaaatctcgcagcccgccaatatctcccccgcgaaacggcttatctcatct
atagattggtcgaccctcgatgtgcgtaatcacagtactcccaaattcaaacccgaattc
gagaggaaaccccgaaagcgggccaagaggattgatgtcaagcgggacaagattaattcc
aggaaggaggagatcggcaacaaggtggtgaagccgctctcactgcgatcgaggataaaa
ttggcttccaggagaataggtgtacggtcatag

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