Candidatus Kirkpatrickella diaphorinae: N5W20_00355
Help
Entry
N5W20_00355 CDS
T09554
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Pathway
kdp00270
Cysteine and methionine metabolism
kdp00450
Selenocompound metabolism
kdp00670
One carbon pool by folate
kdp01100
Metabolic pathways
kdp01110
Biosynthesis of secondary metabolites
kdp01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
N5W20_00355 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
N5W20_00355 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
N5W20_00355 (metH)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
N5W20_00355 (metH)
Enzymes [BR:
kdp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
N5W20_00355 (metH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S-methyl_trans
Met_synt_B12
Pterin_bind
B12-binding_2
B12-binding
CdhD
Raco_middle
Motif
Other DBs
NCBI-ProteinID:
UYH51375
LinkDB
All DBs
Position
complement(65018..68521)
Genome browser
AA seq
1167 aa
AA seq
DB search
MTRPALLELLRDRVLLCDGGMGSKVQMLDLDTERDYWGQENCTDILSLSRPEIIRDIHRS
YFEAGADMVETNSFGGSVITLAEFGLQDRAREINKLSAELAREAAESFVDGRHRYVIGSV
GPGTKLPSLGNIDYDTLEAGLVVQCLGLIDGGVDAILIETCQDTLQIKAAVNAAKIARGQ
LGKETPIFVQVTVETTGTLLVGPDIAAAATVVNALDVPLMGLNCATGPQEMAEHISWMAE
NWPGLISIQPNAGLPELVDGKTHYPLSPDDMASWVERFVLEDGINLVGGCCGTSTPHIAA
LDTMLRKLGQDSWRPTPVKRSVHWVPSVASLYTQTALRQENSYFSIGERCNANGSKKWRT
LQEAHDWDGCVAVGREQAAEGSNALDVCTAFVGRDEIAEMNEVITRFTAAVNAPLVIDST
ETNVIEAALKRHGGKPIINSINFEDGRDHADARMRLARKFGAAVIGLTIDEVGMAKTPED
KLRIADRLIEVACGEFGLPQADLMIDPLTFTIATGVEDDRKLGLWTLEGIRLIREKYPEV
QIILGLSNISFGLNAAARAVLNSVFLDHAVKAGMTGAIVHVSKIRPLHLIAAEEVQVAED
LIFDRRREDYDPLQKLLSLFSGRKAEDATAKRRAETPEERLKDRIVDGDRKGIEEDLAAA
MEKIAPLNIINDVLLDGMKVVGELFGSGKMQLPFVLQSAETMKHAVAYLEPYLEKTEGQA
RGTMVLATVKGDVHDIGKNLVDIILTNNGYQVINLGIKVPVADMIAAAKAHQADAIGMSG
LLVKSTVIMRENLEEMARQGLQIPVFLGGAALTRNYVEDDCVKAYGQDVAGRVAYARDAF
DGLSLMDKVVQNQFDDYLAALQTQRAGRKSRNVSRVIENAETRGFAPVDVAVVRARRQRI
NHDVPVPDAPFFGPRALEAKVNAVLPFLNERSLYQFQWGFKKDGRSLEAFLAYARTEFKP
VLKRMLKICEDENILQPCASYGYWKAAGEGNNLILFDATGQNEVARFALPRQPKEDGECI
ADFVRDVDDAQRDVIGLQVVTVGQKASDLARDWFEANRYQDYLYLHGLSVEIAEAMAEYT
HKRMRAELGFSSEDARDREKLLAQGYRGARYSFGYPACPRLEDQTSILNLLEADRMGISL
SDGYQLHPEQSTSALVIFNPKAKYFTV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcccagccttgcttgaacttctgagggatcgcgtcctcctctgtgatggcggg
atgggctcaaaagtgcagatgctcgaccttgatacggagcgggattattgggggcaggaa
aattgcaccgatatcctctctctctcacgccctgaaatcatccgggatattcaccgcagc
tattttgaagccggggcggatatggtcgaaacaaacagtttcgggggctccgtcatcacg
ttggcggagttcggccttcaggaccgcgcgcgcgagatcaacaagctgtccgctgaattg
gcgcgtgaagcggcggagagcttcgtcgatgggcgccatcgctatgttatcggctctgtc
ggcccgggcaccaaactcccctcactgggcaatattgattatgacacgctggaagcgggc
ctcgtcgtccaatgccttggcctgattgatggcggggttgacgccatcctgatcgagaca
tgccaggatacgttgcaaatcaaggccgccgtcaatgccgcgaaaatcgcgcgcgggcaa
ctcgggaaggaaacgccgatttttgttcaggtgacggtggaaacgaccggcaccctcctt
gtcgggcccgatattgcggcggcagcgactgtcgtgaatgcgctggatgtgcccttgatg
ggccttaattgcgcgaccggcccgcaggaaatggcggaacatatcagctggatggccgag
aactggccggggctgatctccatccagcccaatgccggtctgccggaattggtcgatggc
aagacgcactaccccctctcacccgatgacatggccagctgggttgagcgtttcgtgctg
gaggacggcatcaatctcgtcggcggatgttgcgggacatcaaccccgcatatcgcggcg
ctcgacacgatgttacgcaaattgggtcaagattcatggcgcccgacgccggtaaagcgc
agcgtccattgggtgccctctgtcgccagcctctacacgcaaaccgcgctgcggcaggag
aatagttacttttccatcggcgaaagatgcaacgctaatggctcgaaaaaatggcgcaca
ttgcaggaagcgcatgactgggatggatgcgtcgcggtcgggcgggagcaggcggccgag
ggctcaaacgcgctcgatgtgtgcaccgcttttgtcggccgtgatgagattgcggaaatg
aatgaggtgatcacgcgcttcaccgccgccgtcaatgcacccctcgtgatcgattcaacg
gaaacgaacgtgatcgaggccgcgctgaaacgtcatggcggtaaacccatcatcaactcc
atcaatttcgaagatgggcgggaccatgcggatgcacggatgcgcctggcacggaaattc
ggggccgccgtgatcgggctgacgatcgacgaagtcggcatggccaaaacgccggaagat
aaattgcgcattgccgaccgtttgattgaggtggcgtgtggggagttcggcctgccgcag
gctgatttgatgatcgaccccctcaccttcacgatcgcgaccggcgtggaggatgatcgc
aaattggggttgtggactcttgagggcattcgccttatccgcgaaaaatatccggaggtg
cagattattctcggcctctccaatatttcattcggccttaacgcggcggcgcgcgccgtg
ctgaattccgtcttccttgaccatgcggtcaaagcgggcatgacgggcgcgattgtgcat
gtcagtaaaatccgcccgcttcatctgatcgcggcggaggaggtacaggtcgcggaagac
ctcattttcgaccggcgtcgggaggattacgaccctctgcagaaactcctgtctctcttc
agcgggcgcaaggcggaggacgccaccgccaagcgccgcgctgaaacgccggaagagcgc
ctgaaagaccggattgtcgacggagaccggaaagggattgaggaagatctcgccgccgcg
atggagaaaatcgcgccgctcaacatcattaatgacgtcctgcttgacgggatgaaagtc
gtgggagagcttttcggttctgggaagatgcagttgcccttcgtgctgcaatccgccgaa
acgatgaagcatgctgtcgcttatctggagccttaccttgaaaaaactgaaggtcaggcg
cgtggcacgatggtgctcgccacggttaaaggcgatgtgcatgatattggcaaaaatctc
gtcgatatcatcctgaccaataatgggtatcaggtgatcaatctcgggattaaagtgccc
gtcgcggatatgattgccgccgcgaaggcccatcaggcggatgccatcggcatgtcaggc
ctgcttgttaaatccaccgtcatcatgcgggaaaatctggaggaaatggcgcgacagggg
ctgcagatacccgtttttctcggtggggcggcgctgacgcgcaattacgtcgaggatgat
tgcgtcaaagcctatggccaggatgtggccggacgcgtggcctatgcgcgggacgctttt
gacggcctgtctctcatggataaagtcgtgcaaaaccagtttgacgattatctcgccgcg
ctccagactcaaagggcggggcgtaaatcacggaatgtctcccgagtgattgaaaatgct
gagacgcgcgggtttgcgcctgtcgatgtggctgttgtgcgcgcgcgacgacagcggatc
aatcacgatgtccccgtgccggacgcgccatttttcggcccgcgcgcgcttgaggcaaaa
gtgaacgcggtgcttcccttcctgaatgagcggtcactttaccagtttcaatggggcttc
aagaaggatggacgctcattggaagcgttccttgcctatgcgcggacagaatttaaacct
gtcctcaagcgtatgctgaaaatctgcgaagatgagaatattctccagccttgcgccagt
tacggttattggaaagcggccggtgagggtaataacctcattttgttcgacgcgacgggt
cagaatgaagtcgcgcgatttgccctgccgcggcagccgaaagaagatggtgaatgcatc
gccgattttgtgcgggatgtggatgacgcccaacgcgacgtcattggccttcaggtcgtg
acggtcgggcagaaagcgtcggacctggcgcgggactggtttgaggccaatcgttatcag
gattacctctatttgcatggcctctctgtcgagattgcagaggccatggcggaatacacg
cataagcggatgcgcgctgaactcggattctccagcgaggatgcgcgcgaccgggaaaaa
ttgctggcgcagggttatcgcggcgcgcgctattctttcggctatcccgcctgcccgcga
ttggaagatcagacttccattctgaacctgcttgaggccgatagaatggggatttcgctt
tcagatggctatcagctccacccggagcaatcgacctccgcgctcgtgattttcaacccg
aaagccaaatatttcacggtgtaa
DBGET
integrated database retrieval system