Candidatus Kirkpatrickella diaphorinae: N5W20_02080
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Entry
N5W20_02080 CDS
T09554
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Pathway
kdp00300
Lysine biosynthesis
kdp00550
Peptidoglycan biosynthesis
kdp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
N5W20_02080
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
N5W20_02080
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kdp01011
]
N5W20_02080
Enzymes [BR:
kdp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
N5W20_02080
Peptidoglycan biosynthesis and degradation proteins [BR:
kdp01011
]
Precursor biosynthesis
Amino acid ligase
N5W20_02080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
UYH52207
UniProt:
A0ABY6GKZ2
LinkDB
All DBs
Position
complement(468393..469937)
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AA seq
514 aa
AA seq
DB search
MQLQELFKQARVTLPSSVKPEWAGRTVSGVTSDSRLASLNSLFVAIDGAAVNGATFVPQA
VAKGAAIVMSHHGPNAVTTIAGRDILHLASANPRRDLALLAAAFYGAQPAEIAAITGTNG
KTSTADFLRQIWMMQGFRSASIGTLGLVSKGLDLRLPPLTTPDPVKLAETLHELKTRRVD
HVALEASSHGLDQFRLDGVRLTRAGFSNLTRDHLDYHHTLDAYRDAKLRLFREVLPTGGV
AAINADMDSETLAILKDIATSRALALRTVGMGGETLRLVSATPLPTGQRLKLCLNGEMLD
DITIPLIGRVQVDNILLAAALAWDDEDSARQICQGLTQLQGVRGRCEFVATSHHGASIFV
DYAHTPDALGHVLQSLRPHARHRLTVIFGAGGNRDQGKRPLMGQIAARYADQCIVTDDNP
RDEDPATIRRAVMQGCPDATEIGDRHTAIAHAVLHAEAGDIVVVTGKGHETGQIIKGAVH
PFDDAAVIREILTAAQGGSDIEAANGVNAHDTPG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgcaggagctattcaaacaagcgcgcgtcaccctgccctcctccgtcaagccg
gaatgggcaggtcggacggttagcggggtgacgagtgacagccgcctggcctccttgaac
agtctcttcgtggcgatcgacggcgccgccgttaatggcgcaacatttgtgccgcaggcc
gtggcgaagggggctgctatcgtcatgtcccatcacggccccaatgcagtgaccaccatc
gcgggccgagacattttgcaccttgcctccgccaacccccggcgcgacctcgccctcctg
gccgccgcattttatggcgcgcaacctgctgagatcgcggcgatcaccggcacgaatggc
aagacaagcacagcggattttctgcggcagatctggatgatgcagggctttcgttccgcc
agtatcggtacgctcggacttgtttccaaggggttggatctgcgcctccctcccctgaca
acgcctgacccggttaagctggccgagactttgcacgagctgaaaacccgccgcgtggat
cacgtggcgctggaagcctcgtctcacgggctggatcagtttcgccttgatggcgtcaga
ttgacacgcgcgggtttctccaacctcacgcgggaccatctggattatcatcacacgctt
gacgcctatcgcgacgctaaattgcggcttttccgagaagtcctccccacgggcggcgtg
gcggcgatcaatgcggatatggattctgaaacgcttgcgatattgaaggatatcgcgacg
tcacgcgccctcgcgcttcgcacagtggggatgggtggtgagacgctgcggcttgtcagt
gcaacgcccctcccgacagggcagcgtctgaaactctgtcttaacggggaaatgctggat
gacatcaccatccccctcatcgggcgtgtgcaggtcgacaatatcttgctggcagccgct
ctggcttgggacgatgaagattccgcccgtcagatctgccagggcctgacacaattacaa
ggcgtgcgcggacggtgtgagtttgtcgccacatcgcatcatggtgcctcgatatttgtg
gattacgcccatacgcccgacgcgctcggccacgtgctgcaaagcctgcgcccgcatgcg
cgccatcgattgacggttattttcggcgcgggtggcaatcgtgatcaggggaagcgcccc
ttgatgggtcagattgccgcaagatatgcggatcaatgcatcgtcaccgacgataatccg
cgtgatgaggaccccgccaccatccgccgggccgtcatgcaggggtgccctgacgccacg
gaaatcggcgaccgtcatacggccatcgcccatgccgtgctgcatgccgaagcaggcgat
atcgtcgtcgtcaccggcaaggggcacgagaccgggcagattatcaaaggcgcggtgcat
ccgtttgatgatgccgccgtcattcgagagattttgacagccgcgcagggcggttctgac
attgaggcagcaaacggggtgaatgcacatgacacgcctggttaa
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