Candidatus Kirkpatrickella diaphorinae: N5W20_08560
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Entry
N5W20_08560 CDS
T09554
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Pathway
kdp01501
beta-Lactam resistance
kdp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N5W20_08560
01503 Cationic antimicrobial peptide (CAMP) resistance
N5W20_08560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kdp03036
]
N5W20_08560
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kdp02000
]
N5W20_08560
01504 Antimicrobial resistance genes [BR:
kdp01504
]
N5W20_08560
Chromosome and associated proteins [BR:
kdp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
N5W20_08560
Transporters [BR:
kdp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
N5W20_08560
Antimicrobial resistance genes [BR:
kdp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
N5W20_08560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
FTR_C
CHB_HEX_C
HCV_NS4a
Motif
Other DBs
NCBI-ProteinID:
UYH51126
LinkDB
All DBs
Position
complement(1940143..1941330)
Genome browser
AA seq
395 aa
AA seq
DB search
MANRKKLLFTGGAIFCLYVGSLLIGRIVHGWELRRVTQSGAIEDVAVLTPKPADPMVSIT
LPGTIDAWYSARIYPQVSGYVKMWFKDYGADVQAGDLMAEINAPSLDAQFAQAKADLSAA
EAKYNLSVVTAKRWQAMGKSQSVSGQAVSVSVANMKSQQATLEAAQHNVDRFAALEKFKS
IVAPFSGVVTARNISVGDYVRDGSGDMDAKGDAKEMFTVAQVDKLRLFVSVPEVFAYILQ
PGLEADVTVPQFPNRTFKARFLTMARGFDSNTRTAVTEFVMENADHELWPGTFASIKLTA
KNSHSTVRQIPSGALVFQEKGMQVATVDKDNRVHFKDIKVGRMADTSTEVLSGLAADDRV
INNPPADLLEGDKVNVVIPAKGYDHAADADGAEAK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgtaaaaaacttcttttcacggggggggcgattttctgcctttatgtcggg
tctctcctcatcggtcgcatcgtccatgggtgggagcttcgccgggtcacgcaatccggc
gccattgaggatgtcgctgtgctgacaccgaaaccggcagatcccatggtgtccatcacc
ctgcccggcacgattgatgcctggtattccgcgcggatttatccgcaggtctccggctat
gtgaaaatgtggttcaaggattacggtgcggatgttcaggccggtgatctcatggcggag
atcaatgcgcccagccttgacgcgcaatttgcgcaggccaaggcggatctctccgcggcg
gaagcgaaatataatctttccgtcgtcacagccaaacgttggcaggccatgggcaaatca
cagtccgtttccggacaggctgtctccgtctctgtcgcgaacatgaagtcgcagcaggca
actctggaagccgcgcaacataatgttgaccggtttgccgcgcttgagaaattcaaatcc
atcgtcgcgcctttttcaggcgtcgtcaccgcacgtaacatcagtgtcggagattacgtg
cgggatgggtccggcgatatggatgcgaagggcgacgccaaggagatgttcacggtcgcg
caggtcgataaattgcgtctcttcgtctccgtgccggaagtttttgcctatattcttcag
ccgggccttgaggcggatgtcacagtgccgcaatttcccaaccgcaccttcaaagcgcgt
ttcctgacaatggcccgcggttttgattcgaacacgcgcacggcggtgacggaattcgtc
atggagaatgctgaccatgaattatggcctggcactttcgcctctatcaagctgaccgcg
aagaacagtcacagcacggtgcggcagatcccgagtggcgccctggtgtttcaggagaag
ggcatgcaggtcgcgacggtggacaaggataatcgggtccatttcaaggacatcaaggtg
ggccgcatggcggatacatccactgaagtgctttccggccttgcggcggatgatcgcgtc
attaacaacccgccggccgacctcctggagggggataaggtcaatgttgtcattccggca
aaaggttacgaccacgctgccgatgccgatggggccgaagcgaaatga
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