KEGG   Kwoniella europaea: 91105879
Entry
91105879          CDS       T10999                                 
Symbol
V865_007078
Name
(RefSeq) uncharacterized protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
ker  Kwoniella europaea
Pathway
ker03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ker00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    91105879 (V865_007078)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ker03400]
    91105879 (V865_007078)
Enzymes [BR:ker01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     91105879 (V865_007078)
DNA repair and recombination proteins [BR:ker03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     91105879 (V865_007078)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT_2 BRCT RNA_ligase DNA_ligase_A_C LIG3_BRCT PTCB-BRCT RTT107_BRCT_5 MurD-like_N
Other DBs
NCBI-GeneID: 91105879
NCBI-ProteinID: XP_066086930
UniProt: A0AAX4KUH6
LinkDB
Position
2:join(1990976..1991299,1991361..1991495,1991583..1991719,1991777..1991862,1991915..1992051,1992111..1992318,1992388..1992466,1992518..1992603,1992661..1992696,1992753..1992951,1993011..1993094,1993152..1993173,1993228..1993349,1993421..1993480,1993545..1993633,1993689..1993713,1993772..1993815,1993862..1993983,1994066..1994160,1994223..1994260,1994319..1994399,1994459..1994587,1994645..1994747,1994809..1995154,1995216..1995308,1995373..1995423,1995484..1995578,1995633..1995770,1995837..1995913,1995974..1995990)
AA seq 1085 aa
MDRTRYHKHPLPPGPTSSQLDPDDDLLAAPPASQPEPPQEPPPTTLEKPADCVNIYPTPH
FSLLCTMMDRLRTEEASKRRDILRRFMDLWRIKVGNDLYPLIRLLLPDRDRERPVYNLKE
AMLAKCYIEVLGLDRHSEAAMRLIKWKQPVDGKAESHSGDFARVCYYEIAARSTVEQGQL
SIDAVNILLDQLAQGRLKQQEYVPILRKINQQCTAAEQEWIIRIILKDLRISIKEKGVFG
CFHPDAGDLFNVCSDLKRVCWTLYKPEKRLEKHQANIELFRSFLPQLCYRSPSSSHEAIA
RLIGGPTTEFIMEEKLDGERMQLHMRGSGAQWFYCSRKAKDYTYLYGAHIGEGSLTQHIA
GAFQDGVRNIILDGEMLVWDPILEKYVAFGTLKTAAGDRVNDENAPRPCFKIFDILYLND
RCLTHKRLSERKRLMRSDRIFRNIDEYKGRLEYAEEHRGKNGKDIRAMLERILESRGEGL
VVKKADAIYQTNSRGADWIKVKPEYSDQMGENLDLLVLGGWWGKGGRTGKISSLLCGLRV
QQDDDGTGTKPEFSTFCSVGSGMSYEDYEWILNKHKNHWKNFDRANPPSWLRLGQIGLDD
KPDVYIEPENSFVVEVKASEIVPAIANYGCGYTLRFPRCRYIYFDKASRDHPTGDDSQDR
DMWNCNSSGENPANGRTEFMALLNKPKKRYADAEGGSLRKKRKVVTRKAIQLMTSTRGQK
LSDDQVESNIFGGFTFYIPKGTAQHPKQDLEALVHKHGGEFTQAQLSDMSALVISPDEKN
PLVRAQIRKGVTVIKPKWIFESIERRRPLPMLEELLVFASEEAKDDRYFGKTLAEIDKMT
LVRDRGGSNGLDGEEDEAEEVENDYDQEDDMAQHEHEANKTVEQVKMEEEWGLRRSPSPV
SSKPTSRATSRAASPDESDTDDERYNEYKEEEEENDSHESSPAALEDSRLLPVRGADIAE
DAGMGEDSSAMNYDEDSIFNHLVFYIDTPDNATKNGLGPSTPHAQAAERLQQAEKLLREN
GGKIVKDINDRKLTHIIMDDEDSGRYAEIVKTTALPKRKHIVLPSWVIECVDEETLMNED
GHKPK
NT seq 3258 nt   +upstreamnt  +downstreamnt
atggacagaacgcgatatcacaaacaccctttacctcccggaccaacttcctctcagctc
gatccagatgatgatctcctcgctgcacctccagcgtctcagcccgaaccacctcaagaa
ccacccccaacgacattagagaaacctgcagattgcgtgaacatttaccctacacctcac
ttctcgttactatgcactatgatggacagactgagaaccgaggaagcaagtaagaggaga
gacatattgaggaggttcatggatctatggaggataaaagtgggaaatgatctttaccct
ttgatcaggcttctactgccggatagagatagggaaagaccagtgtataacctgaaagaa
gcaatgttggcgaaatgctatatagaagtgttaggtctagatagacatagtgaagcggca
atgagattgataaagtggaagcagcctgtagatggaaaggctgaatcgcactctggtgat
ttcgctagagtatgctactatgaaatagcagcaagatcgaccgtagagcaaggtcaacta
tctatcgacgctgtcaacatattactcgatcagctcgctcaggggagactgaaacagcag
gaatacgtccctatattgcgaaagattaaccaacagtgcacagcagctgaacaagagtgg
ataatcaggatcattctgaaagatttgaggatatctataaaagaaaagggtgttttcgga
tgtttccaccctgatgctggagatttgttcaacgtttgttcggatctcaagagagtctgt
tggacattatacaagccagagaagaggttggaaaaacatcaagccaatatcgaattattt
cgttctttccttcctcaactatgttatcggtctccctcttcatcacacgaagctatagcc
agattgatcggaggaccaactaccgagtttatcatggaggaaaagttggatggagaaaga
atgcaattacatatgagaggtagtggtgcacagtggttttattgttcgagaaaagcgaaa
gattatacgtacctatacggagcacatataggagaaggtagtttgacgcaacatattgcg
ggagcttttcaggacggcgtgagaaacatcatattggatggggagatgctggtttgggac
cctattttagagaaatatgtagctttcggaacacttaagacggctgctggagatcgagtg
aacgacgagaacgcgcctcggccttgttttaaaatctttgatattctttacctgaacgat
cgatgtctcactcacaaacgattatcggaacgtaagcggttgatgagatcggatcgaata
ttcagaaatatcgatgaatataaaggcagattggaatacgccgaggagcacagagggaag
aatgggaaggatatcagagcaatgttggaacggattttggaatctagaggagaaggactg
gtggtgaagaaggccgatgcgatatatcaaacgaattctagaggtgcagattggatcaaa
gtaaaacctgagtattctgatcagatgggagaaaacctcgatcttctggttctaggtgga
tggtggggaaaagggggaagaacagggaagatatccagtcttctttgtggactaagagtg
cagcaggatgatgacgggacgggcacgaaaccagagttttccacgttttgctcggtcggg
tcaggtatgagctacgaggattatgagtggatcttgaacaaacacaaaaatcattggaag
aacttcgatagagccaatccaccatcgtggttacggcttggtcagataggcttagatgat
aagcccgatgtgtacatcgagcctgaaaactcattcgtagtggaggtaaaagcttcggag
atcgtccctgcaattgccaattacggttgtggctatactcttcgatttcccagatgtcgt
tatatctactttgataaagccagtagagatcatcctacgggtgatgacagtcaagatagg
gatatgtggaattgtaattcaagtggtgaaaatccagctaatggaagaacagaattcatg
gctcttcttaacaaacccaaaaagcgatatgcggatgctgagggtggatctttgaggaaa
aagagaaaagtcgtcaccagaaaggctatccaacttatgacgtccactcgaggtcagaaa
ctctcagatgatcaggtagaaagtaatatctttggcggttttacattctatataccgaaa
ggcacagctcagcatcccaagcaggacttggaagctctagttcacaagcatggaggagaa
ttcactcaagctcaattgtcggacatgtcggccttggtcatttcgcctgatgagaaaaat
ccccttgttcgcgctcagatacgaaaaggagtaaccgtgatcaaacctaaatggattttt
gagagtatagaaagacgaagaccattgcccatgttggaagaattgttagtcttcgcatct
gaagaggccaaagatgatcgatacttcggtaaaacattagcagagattgacaagatgaca
cttgtccgtgatcgtggtggatcgaatggtctggacggagaagaggatgaagctgaagaa
gttgagaatgactacgatcaagaagacgatatggctcaacacgaacatgaagccaataaa
acagttgaacaggtgaaaatggaagaggaatggggattgcgtaggtcgccttcgcccgtt
tcatctaaacctacctctcgagctacgtctagagctgcaagcccagatgagagtgatacc
gatgatgagagatataatgagtacaaagaggaagaagaggagaacgatagtcatgaatct
tcgccggctgccctggaagactctaggttgttacctgtaagaggtgctgatatagcagaa
gatgcaggtatgggggaagattcctcagctatgaattatgatgaagacagcatcttcaat
catttggtattttacatcgatactccggataatgcaaccaagaatggtttaggtccatcg
acacctcatgctcaagccgcggaaagattacaacaagctgaaaagctattgcgagagaat
gggggcaaaattgtgaaggatatcaacgataggaagctgactcatatcatcatggatgat
gaggattctggaaggtacgctgagatagtgaagacgactgctttaccaaagaggaaacat
atcgtacttcccagctgggtaattgaatgtgttgacgaagagacacttatgaatgaggac
ggtcataaaccgaaatag

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