Candidatus Kinetoplastidibacterium galati: ST1E_0852
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Entry
ST1E_0852 CDS
T02466
Name
(GenBank) DNA ligase (NAD+)
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
kga
Candidatus Kinetoplastidibacterium galati
Pathway
kga03030
DNA replication
kga03410
Base excision repair
kga03420
Nucleotide excision repair
kga03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ST1E_0852
03410 Base excision repair
ST1E_0852
03420 Nucleotide excision repair
ST1E_0852
03430 Mismatch repair
ST1E_0852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kga03032
]
ST1E_0852
03400 DNA repair and recombination proteins [BR:
kga03400
]
ST1E_0852
Enzymes [BR:
kga01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ST1E_0852
DNA replication proteins [BR:
kga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ST1E_0852
DNA repair and recombination proteins [BR:
kga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ST1E_0852
NER (nucleotide excision repair)
GGR (global genome repair) factors
ST1E_0852
MMR (mismatch excision repair)
DNA ligase
ST1E_0852
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ST1E_0852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
BRCT_2
Nlig-Ia
PTCB-BRCT
HHH_5
HHH
5_3_exonuc
Zn_ribbon_PADR1
DUF34_NIF3
Motif
Other DBs
NCBI-ProteinID:
AGF49185
UniProt:
M1MBF2
LinkDB
All DBs
Position
complement(530021..532075)
Genome browser
AA seq
684 aa
AA seq
DB search
MFKDIDFIKDKIEDLRRTIEEHNIHYYCYDSPIISDLEYDRLMSELSNLESMYPNLITEY
SPTQRVGSSPLMSFNKVKHSVPMLSLSNAFTSEDVNLFNKKVISSLCKKIDIKDDIEYFC
DLKLDGLAVNLRYENGVLVHGSTRGDGYIGEDVTSNVRAIKSIPLRLIGDVPKILDVRGE
VLMYNKDFDDLNNKNIKKGERVFVNPRNAAAGSLRNLDSKISSMRKLRFFAYGWGNINDN
NEINEISKFEHKTHESVLNWFVLLGLPVNKKYHKVVSGISGILSYYDSIVNNRNSLPYGI
DGVVYKVNSLDKQKILGYSSRAPRFALAHKFLAEEAITQIVGIDVQVGRTGAITPVARLK
PVFVGGVTVSNATLHNENEIKRKDIRIGDFVIIRRAGDVIPEVVSTVIDLRPNNTIQFIM
ADRCPVCNSSIKRIDNEIVYRCTGGLYCPAQLKQSLKHALSRKALNIVGFGEKLIEKLVD
NGYLRSLVDIFRLTISDLMNIDLVAEKSATNLLKSINSARKPSLSSFLFAMGIRHVGETT
AADIAKKFKTIDNIIIASFDELLSVNDIGYRTANSIKLFFSEKHNLDVIYSLRSIDVYPI
SEEYEKVSEKLKGKSFAVTGKFQDYSREEIIKYIESNGGKVTSNISKKNDYLITGENSGK
KLNFAENNGIQIIDQQEFIKLVDL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagatattgattttataaaagataaaatagaagatttgcgtaggactatagaa
gaacataatatacattattattgttatgacagtcctattataagtgatttagaatatgat
cgtttaatgtctgaattatcaaatctagagtccatgtatccgaatttaattactgaatac
tctcccacgcaaagggttggctctagtcctcttatgtcttttaataaagttaaacattca
gttcccatgttatccctttctaatgcatttacatcagaagatgttaatttatttaacaaa
aaagttatttcttcactatgtaagaaaattgatatcaaagatgatattgagtatttttgt
gatctaaaactagatggtcttgctgtaaatcttagatatgagaatggtgttttagttcat
ggatctacacgcggtgatggctatattggtgaggatgttacttctaatgtgcgcgcaata
aaatctataccgttaagattaattggagatgtacctaaaatattggatgtaaggggagag
gtcctcatgtacaataaggatttcgatgatcttaacaataaaaatataaaaaaaggagaa
agagtttttgtaaatcctcgtaatgctgcagctggaagtctaagaaatcttgattccaag
ataagttctatgcgcaagttaagattttttgcttatggttggggtaatattaatgataat
aatgagatcaatgaaatatctaaatttgaacataagactcatgaatcagtgcttaattgg
tttgttttattaggattgccggttaataaaaaatatcataaggttgtatcaggaattagt
ggaatattgagttactatgattcaatagttaataatcgtaattctttaccttatggtata
gatggtgtggtctacaaagtcaattctttagataagcagaaaatccttggatattcttca
agagctccaagatttgctctagctcataagtttttagcagaagaggcaataacacagatt
gtcggcatagatgttcaggttggtagaacaggagctataactccggtagctcgtttaaag
cctgtttttgttggtggtgttactgtttctaatgcaacactacataatgagaacgaaata
aaacgtaaagatatacgtataggagattttgtcataatcagaagagctggtgatgtaatt
ccagaggttgtttctacggttatagacttgagacctaataatacgatacagttcataatg
gcagatcgttgtccagtttgcaattcttccattaaaagaattgataatgagattgtatat
cgctgcacaggcggtttatattgtcccgcgcaattaaaacaaagtttaaagcatgcttta
agccgtaaagctctaaatattgttggttttggagagaagttgattgaaaagttagttgat
aatggatatttaaggtctttggttgatatttttagattaaccatttctgatctaatgaat
atcgatttagtggcagaaaaatctgctactaatctattaaagtctataaatagtgcacgt
aaaccaagtcttagtagctttttatttgcaatggggataaggcatgtgggagaaactact
gctgctgatatagctaaaaaattcaagacaattgataatataattattgctagttttgat
gagttgctatcagttaatgacataggatataggacagctaactccataaaactatttttt
tccgaaaaacataatcttgatgttatatattctctgagatctatagatgtatatcctata
tctgaagaatatgagaaagttagtgaaaaattaaaaggaaaatcttttgcggtaacaggc
aagttccaagattattctagggaagaaattataaaatatatagaaagtaatggtggaaaa
gtaacaagcaatatatctaagaaaaatgattatttaataacaggggaaaattctggaaag
aaattgaactttgcagaaaataatggaatacaaataatagatcaacaggaatttataaaa
cttgttgatctatag
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