Klebsiella grimontii: JJJ10_07715
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Entry
JJJ10_07715 CDS
T07992
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
kgr
Klebsiella grimontii
Pathway
kgr03030
DNA replication
kgr03410
Base excision repair
kgr03420
Nucleotide excision repair
kgr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JJJ10_07715 (ligA)
03410 Base excision repair
JJJ10_07715 (ligA)
03420 Nucleotide excision repair
JJJ10_07715 (ligA)
03430 Mismatch repair
JJJ10_07715 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kgr03032
]
JJJ10_07715 (ligA)
03400 DNA repair and recombination proteins [BR:
kgr03400
]
JJJ10_07715 (ligA)
Enzymes [BR:
kgr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
JJJ10_07715 (ligA)
DNA replication proteins [BR:
kgr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JJJ10_07715 (ligA)
DNA repair and recombination proteins [BR:
kgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
JJJ10_07715 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JJJ10_07715 (ligA)
MMR (mismatch excision repair)
DNA ligase
JJJ10_07715 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JJJ10_07715 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
Prok-E2_C
DZR_2
Motif
Other DBs
NCBI-ProteinID:
QTP41581
LinkDB
All DBs
Position
1601840..1603864
Genome browser
AA seq
674 aa
AA seq
DB search
MESNEQKLTELRTTLRHHEYLYHVMDTPEIPDAEYDRLMRELRELEAQHPELITPDSPTQ
RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNTDDLTYCCELKLDGLA
VSILYENGLLVQAATRGDGTTGEDITSNVRTIRAIPLKLRGDNIPQRLEVRGEVFLPQAG
FEKINEEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPRSHS
ARLQQFKFWGLPVSERVKLCHSPEEVLTYYRKVEEDRPNLGFDIDGVVIKVDSLALQEQL
GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVQVAGVLVSNATLHN
ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEETREIVFPTHCPVCHSDVERVEG
EVVTRCTGGLICGAQRKEALKHFVSRRALDVEGMGDKIIDQLVEKEYVHTPADLFQLTPG
KLTGLDRMGPKSAQNVVDALEKSKETTFARFLYALGIREVGEATAAGLAAHFGTIEALEQ
ASIDDLQKVPDVGIVVATHVRNFFAEESNREVIAQLRKEGVRWPAPVVVNAEEIDSPFAG
KTVVLTGSLSQLSRDDAKARLVALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIAVI
DEDEMLRLLGESRG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgaacgaacaaaaactgactgaactgcgaaccacgcttcgccatcatgaatac
ctgtaccacgtcatggatacgccggaaattcctgatgctgaatacgatcggctgatgcgt
gaactacgtgaactggaagctcaacatcctgaattgattacgcccgattcacctacccag
cgcgtcggcgccgcaccgctagccgcattcagccagattcgccatgaagtgccgatgctg
tcgctggataacgttttcgatgaagagagcttccttgcgtttaataagcgcgttcaggat
cggttgaaaaataccgatgatctgacctactgctgtgagctcaagctggatggcctggcg
gtcagtatcctgtatgaaaacggcttgctggtacaggcggcgacccgcggcgatggaacg
accggtgaagatatcacctccaacgtacgcaccattcgcgctatccctctgaagcttcgc
ggcgacaatattccgcagcggcttgaggttcgtggagaggttttcctgccgcaggcgggg
ttcgaaaaaatcaatgaagaggcgcggcgaaccggcgggaaggtatttgctaacccgcga
aacgccgctgcaggttctttacgccagctcgatccgcggattaccgcgaagcgtccactc
actttcttttgctacggcgtgggcgtgctggaaggcggcgagctgccgcgaagccactca
gcgcgcttgcagcagtttaagttctgggggctgccggtcagcgagcgcgtaaagctctgc
cattctccagaggaagtgcttacttactatcgcaaggttgaagaagatcggccgaatctg
gggtttgatattgacggtgtggttatcaaagtggattcgcttgcgcttcaggaacagctt
ggcttcgtggcccgcgcgccgcgctgggcggtggcgtttaagtttccggcgcaggagcag
atgactttcgtgcgcgatgtcgagtttcaggtcgggcgtaccggcgccatcacgccggta
gcgcgtctggagccggtacaggtcgccggcgtcctggtcagcaacgcgacgctgcataat
gctgatgaaatcgagcgtctggggctgcgcatcggcgataaggtggttattcgccgcgcc
ggtgatgttatccctcaggtcgtgaacgtcgttctctcagaacgcccggaggagacgcgt
gaaatcgtgtttcccacccattgcccggtatgtcattccgacgttgaacgcgtagaaggc
gaagtggtgacccgctgtaccggcggtctgatctgcggcgcccagcgtaaagaagcgctc
aagcattttgtctcccgtcgcgccctggacgtggagggaatgggcgataaaatcatcgat
cagctggttgaaaaagagtacgtgcatacgcctgccgatctctttcaactgacgccgggt
aagcttaccgggctcgatcgcatggggccaaaatcagcgcaaaacgtggtggatgcgctg
gagaagtcaaaagagaccacctttgcccgtttcctttacgcgctggggatccgcgaagtg
ggtgaggcgacggcagccggtttagcggcccactttggcaccattgaggcgctggagcag
gcttcaattgacgatctgcaaaaagtgcccgatgtcgggattgtggtcgccacgcacgtg
cgtaatttctttgccgaagagagcaatcgcgaagtgattgctcagctgcgtaaagaaggc
gtccgctggccggcgccggtggtggtcaatgcggaagagatcgatagcccctttgccggg
aaaacggtggttctgaccggtagcctgagtcagctctcccgtgatgatgcgaaagcccgg
ctggttgcgctcggcgcgaaggtggcgggcagcgtgtcgaagaagaccgacctggttatc
gccggggaggcggcgggctctaagctcgccaaagcgcaggagctagggattgcggtgatc
gatgaagacgaaatgctgcgtctgctcggagagtcgcgtggataa
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