Novacetimonas hansenii: IFJ82_08110
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Entry
IFJ82_08110 CDS
T06979
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
kha
Novacetimonas hansenii
Pathway
kha01501
beta-Lactam resistance
kha01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
kha00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IFJ82_08110
01503 Cationic antimicrobial peptide (CAMP) resistance
IFJ82_08110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kha03036
]
IFJ82_08110
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kha02000
]
IFJ82_08110
01504 Antimicrobial resistance genes [BR:
kha01504
]
IFJ82_08110
Chromosome and associated proteins [BR:
kha03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IFJ82_08110
Transporters [BR:
kha02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IFJ82_08110
Antimicrobial resistance genes [BR:
kha01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IFJ82_08110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RND-MFP_C
BSH_RND
Beta-barrel_RND
HH_MFP_RND
YknX_C
Beta-barrel_RND_2
BSH_CzcB
BSH_CusB
Hyd_WA
HH_EMRA
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
QOF93954
LinkDB
All DBs
Position
complement(1843376..1844563)
Genome browser
AA seq
395 aa
AA seq
DB search
MLRETDCKGKVKIVKSQHYFQALAPVAVLLVLAGCNRKAAAPAIQPQQVSVVTLRAQPVE
IHTSLPGRTEAFEIAQVRPQVSGVIEQRLFVEGSDVKAGQQLYQIYAAPYQAAYDSARGQ
LIRAQAAELTAHAKLTRYGPLLRAHAVSQQDYDDALAADKEAQGEILTAQGQVERAAVDL
GYTKMNAPISGRIGRSILTVGALAIANQSNNVAIVTRLDPIYVDVNLPATELLRFRRELA
QGRLQREGDNAASISLQLEDGTPYEHAGRMEFSEVNVDESTATVVVRAIMPNPDKLLLPG
MYVHAQLTEGTDPQALLVPQEAVSRNSHGDPQVWVVDQDNKVSLRQIQTSQAIGTSWLVT
NGIKSGERVVTVGLQKIHPGATVTPIEAQPAGKAG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgggagacagactgtaaaggcaaggtcaagattgtgaaaagccagcattatttt
caggccctcgcccctgttgctgtcctgcttgttctggcgggctgcaatcgcaaggcggcc
gcccctgcgatacagccacagcaggtcagcgtggtgacgctcagggcgcagcctgttgaa
atccataccagcctgccaggacgcacggaagcctttgaaatcgcgcaggtccgcccgcag
gtcagcggtgtgatcgaacaacgcctgtttgtcgaaggcagcgatgtcaaggccgggcag
caactttaccagatctatgccgcaccgtatcaggccgcctatgattcggcacgggggcag
cttatccgcgcacaggcagccgaactgacggcccatgcgaaactgacccgctatggtccg
ctcttgcgcgcccatgccgtcagccagcaggattatgacgatgcccttgccgcagacaag
gaagcgcagggagaaatcctgaccgcgcaggggcaggtggaacgcgccgcggtggacctt
ggctataccaagatgaatgcccccatcagcgggcggatcggtcggtccatcctgacggtt
ggcgcgctggccatcgcgaaccagagcaataacgtcgcgatcgtaacgcggcttgacccg
atttatgtcgatgtcaacctgccggccaccgaactgctgcgtttccgtcgcgaactggca
cagggacgcctgcagcgcgaaggcgataatgccgccagcatctccttgcaactggaggac
ggcacgccatacgaacatgcaggccggatggaattttccgaagtcaatgtcgatgagtca
accgccaccgtagtggtgcgcgcaatcatgcccaacccggacaagctgctgctgccgggg
atgtacgtgcatgcgcaactgaccgaaggaacggacccacaggccctgctggtgccgcaa
gaagccgtcagccgcaattcccatggcgacccgcaggtgtgggtcgtggatcaggacaac
aaggtgtcgctacgccagatccagacatcccaggcaatcggtacaagctggctggtaacg
aacgggatcaaaagcggggagcgggtcgtcaccgtgggcctgcaaaagatccaccccggt
gcgacagtaacccccatcgaggcccagcctgcgggcaaggcagggtaa
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