Kineothrix sp. MB12-C1: RBB56_15360
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Entry
RBB56_15360 CDS
T09298
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
kib
Kineothrix sp. MB12-C1
Pathway
kib00300
Lysine biosynthesis
kib00550
Peptidoglycan biosynthesis
kib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
kib00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RBB56_15360
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBB56_15360
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kib01011
]
RBB56_15360
Enzymes [BR:
kib01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RBB56_15360
Peptidoglycan biosynthesis and degradation proteins [BR:
kib01011
]
Precursor biosynthesis
Amino acid ligase
RBB56_15360
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF5064
TrkA_N
LpxD
Motif
Other DBs
NCBI-ProteinID:
WMC92211
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Position
3359417..3360919
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AA seq
500 aa
AA seq
DB search
MRKLSDLLEKLEYECVMGTTDIHVDAVIYDSRKVMENSLFICITGAKSDGHDFAEDVVEK
GAKVLVVEKDIVLSKEAQEKGVTVIKVADTRYAMAFISAAWFDHPARQMKIIGITGTKGK
STTSYFVKSILEHAGHKVGLIGTIEVIIGGKSSHVVNTTPESYLLQEYFRQMADVGCDTV
VMEVSSQGLKLHRTQGFIFDIGIFTNIQPDHIGPDEHADFEEYMACKSLLFRQCKIGIVN
RDDEHWETVTKEHTCELETYGFREGADLRAQNVQLIKKPGELGVVFDVTGLMNFTTEVTT
PGRFSVYNALAAIAICRHFDVEIEKIKEAFMEVKVKGRIEMVKVSDEFTLMIDYAHNAMS
LESLLSTLKEYEPERLVCLFGCGGNRSKYRRYEMGEVSGRLADLTIITSDNPRFEKPQDI
IEDIKIGIGKTDGTYVEICDRKEAIAYAIDHGRPGDIIVLAGKGHEDYQEIEGIKYPMDE
RDIIRDILKEREWKETMQTS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaactaagcgatttgctggaaaagctggaatatgaatgcgtgatgggaacgacc
gatatacatgtggatgcggtaatatatgattcgcgtaaggtgatggaaaatagccttttt
atttgtattacaggtgcaaaatcggatggccatgatttcgcagaggatgttgtggaaaaa
ggtgcaaaagtacttgttgtagaaaaggatatcgttttgtcgaaagaggcacaggaaaaa
ggtgtgacagtgatcaaagtagcggatacccgttatgcgatggcgtttatttcagcagca
tggttcgatcatccggcaagacagatgaaaattatcggtatcacaggaacgaaaggcaaa
tccactacttcttattttgtgaagtcgattctggaacatgcaggacataaagtaggactt
atcggaacgattgaggtaataatcggagggaaaagcagccatgtagtcaatacaacgcct
gaatcttacctattacaggaatatttcaggcagatggcggatgtgggatgtgatacggtg
gtgatggaagtatcgtcacaaggattgaagctccataggacccagggatttatattcgat
attggaattttcacaaatattcagcccgaccatatcggtcccgatgaacatgctgatttt
gaagaatatatggcttgtaagagccttcttttcaggcaatgtaaaattggtattgtaaat
agagatgatgagcattgggaaactgtgacaaaggaacatacctgtgagctggaaacctat
ggattccgtgagggagcggaccttcgtgcacaaaacgtacagttgattaaaaagcccgga
gaactgggtgttgtgtttgatgtgacagggttaatgaatttcacaacagaagtaaccaca
ccgggacgtttcagcgtatataatgcgcttgcggctattgcgatttgcagacatttcgat
gtagagatagagaagataaaagaggcctttatggaagtgaaggtaaagggtcgaattgaa
atggtgaaagtatccgatgaattcactttgatgatagactatgctcacaatgcaatgagt
ctggaaagtcttcttagcacgttgaaagagtatgaaccggagaggcttgtttgtttgttc
ggttgcggaggcaaccggtctaagtatcgtagatatgagatgggagaggtcagcggaagg
ctggcggacctgactattattacttcggataatccgagatttgaaaagcctcaggatatt
attgaggatattaagataggaatcggtaaaacggacggaacctatgtggagatatgtgac
aggaaagaagcaatcgcctatgcgatagaccatggaagaccgggggacattattgtgctt
gcgggaaaaggacacgaggactatcaggagattgaagggataaagtatccgatggacgaa
agagatattattcgggatatcctgaaggagcgtgaatggaaggaaactatgcaaacgtca
taa
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