Kineothrix sp. MB12-C1: RBB56_16920
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Entry
RBB56_16920 CDS
T09298
Name
(GenBank) M15 family metallopeptidase
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
kib
Kineothrix sp. MB12-C1
Pathway
kib00550
Peptidoglycan biosynthesis
kib01100
Metabolic pathways
kib01502
Vancomycin resistance
kib02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
kib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBB56_16920
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RBB56_16920
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RBB56_16920
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kib01002
]
RBB56_16920
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kib01011
]
RBB56_16920
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
kib01504
]
RBB56_16920
Enzymes [BR:
kib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
RBB56_16920
Peptidases and inhibitors [BR:
kib01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
RBB56_16920
Peptidoglycan biosynthesis and degradation proteins [BR:
kib01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
RBB56_16920
Antimicrobial resistance genes [BR:
kib01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
RBB56_16920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
DUF1244
Peptidase_M15_4
DUF6466
Motif
Other DBs
NCBI-ProteinID:
WMC92496
LinkDB
All DBs
Position
3691553..3692551
Genome browser
AA seq
332 aa
AA seq
DB search
MLFFLTVVLTGYYSLRHFKDNGKRYAGVGFVVLFFMLNSSFAFSFPMEDESASISDSTES
IGKFDEASVMEDAEPVLINNQEAPVATEVIEETEEVDFYRMSEHHGLEDEDQYTLEDILE
ENEEYGDSINNESKREEGTETEFNSDDWRLVLINKQHPIPDDYTFELVTIKGSMQCDGRI
REELFAMLQGAKDNDINLVIRSPYRDMSRQEYLFNRKIKSYMQKKMSYMDAYKIASQTVT
VPGASEHQIGLAIDITSDGYAALDRGFGDTEAGKWLAEHSCEYGFILRYPAGKENITGIE
YEPWHFRYVGKEAATIIMEEGITLEEFTESYL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgctattttttttgacagttgtgttgacaggatattattcgctgcggcattttaaagat
aacgggaagagatatgccggtgtaggtttcgttgtcttattttttatgttaaatagtagt
ttcgcattttcttttccgatggaagatgagagcgcttcaatttcggattcaactgaatcc
atagggaagtttgacgaagcctccgttatggaggatgcagagccggtcctaataaataat
caggaggctccggttgctacggaagtaatagaagagacagaagaggtggatttctacaga
atgtcagagcatcatggattggaggatgaggatcagtatactctggaagatattctggaa
gaaaatgaggaatatggagatagtataaataacgaaagtaagagggaagagggaacggag
actgaattcaattcggatgactggcgacttgttcttattaataagcaacatccgattccc
gatgattatacgtttgagcttgtaacgatcaaaggcagtatgcaatgtgacgggcgtatc
agagaggaattgttcgctatgcttcaaggggcgaaggataatgacatcaacctggtaatt
cgttctccttatcgcgatatgagcaggcaggaatatttatttaaccgtaagattaaatca
tatatgcagaagaaaatgtcgtatatggatgcttataagatagcgtcacagacggtaacg
gtaccgggggcgagcgaacatcagataggacttgctatagatattacgagtgacgggtat
gcggcactggatcgaggattcggtgataccgaggcaggaaagtggctggctgagcatagc
tgtgaatatggttttatcttgcgttatcccgcggggaaggaaaacatcaccggtatagaa
tatgaaccgtggcattttcgttatgtaggaaaagaagcagcgacaattattatggaagaa
ggaattacgctggaagaatttacagaaagttacctataa
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