Kluyvera intermedia: NCTC12125_02117
Help
Entry
NCTC12125_02117 CDS
T06042
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
kie
Kluyvera intermedia
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kie03009
]
NCTC12125_02117 (rlmC)
Enzymes [BR:
kie01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
NCTC12125_02117 (rlmC)
Ribosome biogenesis [BR:
kie03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC12125_02117 (rlmC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_ANTKMT
Methyltransf_12
Methyltransf_11
Methyltransf_37
Motif
Other DBs
NCBI-ProteinID:
VDZ84016
LinkDB
All DBs
Position
1:complement(1922885..1924012)
Genome browser
AA seq
375 aa
AA seq
DB search
MQCALFNADRCRSCQWIEQPISEQLAAKMADLQTLLADFAVAEWCAPVSGPEQGFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLTDCPLYPETFAPVFAALKPFIARAGLTPYNVARKRG
ELKYVLLTESQKEGGMMLRFVLRSQSKLEQLRAALPWLQAQLPQLKVITANIQPVHMAIM
EGEQEIFFTQQQALAETFNGVPLWIRPQSFFQTNPTVASSLYATARDWVRALPVNHMWDL
FCGVGGFGLHCATPEMTLTGIEIAPEAIACAKQSAAELGLEKLHFQALDSTQFATAQGEV
PQLVLVNPPRRGIGKALCDYLSEMAPEFIVYSSCNAQSMAKDFTHLAGYQVAKVQLFDMF
PHTAHYEVLTLLVRR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactttttaatgccgaccgttgccgttcctgtcagtggattgagcagccg
atttcagagcaacttgcggccaaaatggccgatctccagacgttgctggcagatttcgcc
gttgccgagtggtgcgcaccggttagcgggccggaacaaggctttcgtaataaagccaaa
atggtggtcagcggcagcgtcgaaaagccgctgctgggtatgctgcaccgtgacggtacg
ccggaagatttaaccgactgtccgctctatccagaaacctttgcgccggtctttgcggca
cttaagccgtttatcgctcgtgcagggctgacaccgtataacgtagcgcgtaagcgcggt
gagctgaaatatgtgctgctcaccgaaagccagaaagagggcggcatgatgctgcgcttt
gtactgcgttcgcaaagcaagcttgagcaacttcgcgcggcgctgccgtggctacaggcg
cagttgccgcagctgaaggtgattaccgctaatattcagccggtgcatatggcgattatg
gaaggcgagcaggagatctttttcacccagcagcaagcgctggcggaaacttttaacggc
gtgccgctgtggatccgcccgcagagcttcttccagactaacccgacggtggcaagcagc
ttgtacgccaccgcgcgtgactgggtgagggcgctgccggtgaatcatatgtgggatctg
ttctgcggcgtcggtggttttggcctgcactgtgccaccccggaaatgaccctgaccggc
attgaaatcgccccagaagccattgcctgcgcgaaacagtcggcggcggaattaggctta
gaaaagctgcacttccaggcgctggactctactcagttcgccaccgcccagggtgaagtg
ccacagttggtgctggtgaacccgccacgtcgcggtattggcaaggcgctgtgcgactat
ttaagtgagatggcgccggagtttatcgtttattccagctgtaatgcgcaaagtatggcg
aaggattttactcacctcgcggggtatcaggtggcgaaagtgcagctgttcgatatgttc
ccccatacggcgcattatgaagttctgacgttgcttgtccggcgttag
DBGET
integrated database retrieval system
