Kitasatospora sp. NA04385: HUT16_23575
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Entry
HUT16_23575 CDS
T08635
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
kis
Kitasatospora sp. NA04385
Pathway
kis03030
DNA replication
kis03410
Base excision repair
kis03420
Nucleotide excision repair
kis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUT16_23575 (ligA)
03410 Base excision repair
HUT16_23575 (ligA)
03420 Nucleotide excision repair
HUT16_23575 (ligA)
03430 Mismatch repair
HUT16_23575 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kis03032
]
HUT16_23575 (ligA)
03400 DNA repair and recombination proteins [BR:
kis03400
]
HUT16_23575 (ligA)
Enzymes [BR:
kis01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
HUT16_23575 (ligA)
DNA replication proteins [BR:
kis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HUT16_23575 (ligA)
DNA repair and recombination proteins [BR:
kis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
HUT16_23575 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUT16_23575 (ligA)
MMR (mismatch excision repair)
DNA ligase
HUT16_23575 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HUT16_23575 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
Nlig-Ia
HHH
HHH_5
PTCB-BRCT
SnoaL_2
Motif
Other DBs
NCBI-ProteinID:
QKW24451
UniProt:
A0A7H8L6A3
LinkDB
All DBs
Position
5269301..5271706
Genome browser
AA seq
801 aa
AA seq
DB search
MEGWEEIPAAVRTRHAELATEVEEHRSRYYEQDAPVVTDAEFDALMRELEALEAAHPALV
TPDSPTQKVGGAPTVLFAPVEHRERLLSLDNAMDDEELAAWAERVATELSGIDYHYLCEL
KVDGLAVNLTYEHGVLVQAATRGDGRVGEDITPNVRTIAEVPHRLHGENLPELVEIRGEV
YFPTEEFDALNASFAAENERRRQENEERAKEGKRPRAMIRLFMNPRNAAAGSLRQKDALI
TASRPLRMVVHGIGARVGFDIDCQSHAYQLLHDWGLPTAKHNKVVGTLEDVRAFIRHFGE
QRHSVEHEIDGVVVKVDEIALQGRLGATSKSPRWAIAWKYPPEEVTGRLAAIEIGIGRTG
RATPYAVLAAPVKVAGSMVQYATLHNQQVVKAKDVLIGDTVVLRKAGDVIPEILGPVYDL
RDGDETPFTMPEKCPECDSVLRPMSEGDIDLRCPNAQHCPAQIRERIAFLGGRQCLDVEG
LGYVAATALTQPLPPVEPPVRNEGDIFGLTEERLLPIKVLVRDPKTGMPKPDDRTGKEKE
VFFFANNAGAPKKNTGVLLANLDKARDRPLWRFLNGLSIRHVGPVAAQALTREFRDLDRV
FAADESELAAVEGVGPTIARAVKEWYAEDWHREILEKWRAAGVVFTEQGAEEQGERPLDG
LTVVVTGTLAGHTRDGAKEALTSRGAKVTGSVSKKTHFVVVGDNPGSKHDKALQLGVPVL
DDAGFAVLLEQGADAARAHLGLEPLETPGPDAAKAPEKGAKAAPGAVGGADGTAPQAGGA
GTNEADAVGENAGEETEKKVS
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
gtggagggctgggaggagatcccggcggcggtgcggacgcggcacgccgagctggcgacc
gaggtcgaggagcaccgctcccggtactacgagcaggacgcgccggtcgtcaccgatgcc
gagttcgacgccctgatgcgggagttggaggcgctggaggccgcgcacccggcgctggtg
acgcccgactcgccgacccagaaggtcggcggcgcgccgaccgtgctgttcgccccggtc
gagcaccgcgagcggctgctcagcctggacaacgcgatggacgacgaggagctggccgcc
tgggccgagcgggtcgccaccgagctgtccggcatcgactaccactacctgtgcgagctg
aaggtggacggcctggccgtcaacctgacgtacgagcacggcgtgctggtgcaggccgcc
acccgcggcgacggccgggtcggcgaggacatcacgcccaacgtccgcaccatcgcggag
gtcccgcaccggctgcacggcgagaacctgccggagctggtcgagatccgcggcgaggtc
tacttccccaccgaggagttcgacgcgctgaacgcctccttcgccgcggagaacgagcgc
cgccgccaggagaacgaggagcgggccaaggagggcaagcggccccgggcgatgatccgg
ctgttcatgaacccgcgcaacgccgccgccggctcgctgcggcagaaggacgcgctgatc
accgcctcccgcccgctgcggatggtggtgcacggcatcggcgcccgggtcggcttcgac
atcgactgccagtcgcacgcgtaccaactgctgcacgactggggcctgcccaccgccaag
cacaacaaggtggtcgggacgctggaggacgtgcgggcgttcatccggcacttcggcgag
cagcggcactcggtcgagcacgagatcgacggcgtggtggtcaaggtcgacgagatcgcc
ctgcagggccggctcggcgccacctccaagtcgccgcgctgggcgatcgcctggaagtac
ccgccggaggaggtcaccggccggctcgccgccatcgagatcggcatcggccgcaccggc
cgggccaccccgtacgcggtgctggccgcgccggtgaaggtggccggctcgatggtgcag
tacgccaccctgcacaaccagcaggtggtcaaggccaaggacgtgctgatcggcgacacc
gtggtgctgcgcaaggcgggcgacgtcatcccggagatcctcggcccggtctacgacctg
cgggacggcgacgagaccccgttcacgatgcccgagaagtgcccggagtgcgacagcgtg
ctgcgcccgatgtccgagggcgacatcgacctgcgctgccccaacgcccagcactgcccg
gcccagatccgcgagcggatcgccttcctcggcggccgccagtgcctggacgtcgagggc
ctcggctacgtcgccgccaccgcgctcacccagccgctgcccccggtcgagcccccggtg
cgcaacgagggcgacatcttcggcctgaccgaggagcggctgctgccgatcaaggtgctg
gtgcgcgacccgaagaccggcatgcccaagccggacgaccggaccggcaaggagaaggag
gtgttcttcttcgccaacaacgccggtgcgccgaagaagaacaccggcgtcctgctcgcc
aacctggacaaggcccgggaccgcccgctgtggcgcttcctgaacggcctgtcgatccgg
cacgtcggcccggtcgccgcccaggccctgacccgcgagttccgcgacctggaccgggtc
ttcgcggccgacgagagcgagctggccgccgtcgagggcgtcgggccgaccatcgcccgg
gccgtcaaggagtggtacgccgaggactggcaccgggagatcctggagaagtggcgcgcc
gcgggcgtggtcttcaccgagcagggcgccgaggagcagggcgaacgcccgctggacggc
ctgaccgtggtggtcaccggcaccctcgccgggcacacccgggacggcgccaaggaggcg
ctcacctcgcgcggcgccaaggtcaccggctcggtgtcgaagaagacccacttcgtggtg
gtcggcgacaaccccggctccaagcacgacaaggcgctgcagctgggcgtcccggtgctg
gacgacgcgggtttcgccgtcctgctggagcagggcgccgacgcggcccgggcgcacctc
gggctggaacccctggaaacccccgggccggacgccgcgaaggcgccggagaagggcgcg
aaagccgcgcccggcgccgtcggaggagcggacggaacggctccgcaggccggcggggcc
ggtacgaacgaagcggacgcggtgggggagaatgccggagaagagacggaaaagaaggtt
tcctga
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