Kitasatospora sp. NA04385: HUT16_33635
Help
Entry
HUT16_33635 CDS
T08635
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
kis
Kitasatospora sp. NA04385
Pathway
kis03030
DNA replication
kis03410
Base excision repair
kis03420
Nucleotide excision repair
kis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUT16_33635 (ligA)
03410 Base excision repair
HUT16_33635 (ligA)
03420 Nucleotide excision repair
HUT16_33635 (ligA)
03430 Mismatch repair
HUT16_33635 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kis03032
]
HUT16_33635 (ligA)
03400 DNA repair and recombination proteins [BR:
kis03400
]
HUT16_33635 (ligA)
Enzymes [BR:
kis01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
HUT16_33635 (ligA)
DNA replication proteins [BR:
kis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HUT16_33635 (ligA)
DNA repair and recombination proteins [BR:
kis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
HUT16_33635 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUT16_33635 (ligA)
MMR (mismatch excision repair)
DNA ligase
HUT16_33635 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HUT16_33635 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_5
HHH_2
BRCT
PTCB-BRCT
HHH
UPF0758_N
DNA_ligase_ZBD
Nlig-Ia
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
QKW23373
UniProt:
A0A7H8L4J0
LinkDB
All DBs
Position
complement(7615484..7617577)
Genome browser
AA seq
697 aa
AA seq
DB search
MTVMNKADLLSSGDYADAVATAARAAAAYYGDGTTTLGDDEYDVLVRAIAAYEEAHPEEV
LAESPTGKVAGGAAQGDVPHSVPMLSLDNVFSGEELADWAASLERRLGRAPAGWCVEPKL
DGLAVAARYEAGVLRRVLTRGNGLAGEDITHTAGDVLGLPALLAEPVDVELRGEVLLTNA
QFERANEIRTAHGAVPFANPRNGAAGTLRAKDRPYRIELTFFGYDAVGLDEESAHSALLE
RLAALGANTAASTAAAPLRCGSVEEVQRRVEEIAGMRAALPFGIDGVVVKADDAADQREA
GSGSRAPRWAVARKLAAEHKVTRLLGVEWAVGRTGVIAPRAVLEPVVIDGVTVSFATLHN
PADIERRGLMLGDRVFVYRAGDVIPRVEAPLVAERTGAEQPIVFPTACPRCGEAIDTGEQ
RWRCVRGRNCQAVASIIYAAGRDQLDIEGLGSTRAVQLVEAGLVRDLADVFTLTREQLLS
LERMGATSTDNLLAAIATARTRPLNRVLCALGVRGTGRSMSRRIAAHFGSMAAIRSADAE
TLAAVEGIGPEKARLVVSELAELSALLDRLTELGVGVQVTEPTAPVLVLAAGAAGAAEGT
EGTEGAGVPVGGPLAGEAVVVTGSMTGPLAALSRNEVNELIERAGGKASSSVSKRTTLLV
AGEKAGSKRAKAEELGIRVLAPEEFAALVAEHLPVAV
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcatgaacaaggccgatctgctctcttccggcgactacgccgacgccgtcgcc
actgccgcccgggccgccgccgcctactacggggacgggacgaccacgctcggggacgac
gagtacgacgtgctggtgcgggcgatcgcggcctacgaggaggcccatccggaggaggtg
ctggccgagtccccgaccgggaaggtcgcgggcggcgccgcgcagggggacgtcccgcac
agcgtgccgatgctctcgctggacaacgtcttctcgggggaggaactcgcggactgggcg
gcctccttggagcgccgcctcgggcgggcgccggccggttggtgcgtggagccgaagctg
gacgggctggcggtcgcggcccggtacgaggcgggcgtgctgcggcgggtgctgacccgc
ggcaacggcctcgcgggcgaggacatcacgcacaccgcgggcgacgtgctgggcctgccg
gccctgctcgccgagccggtggacgtcgagctgcgcggcgaggtgctgctgacgaacgcc
cagttcgagcgggcgaacgagatccgcacggcgcacggcgcggtgccgttcgccaatccg
cgcaacggcgcggcgggcacgctgcgggccaaggaccggccgtaccggatcgagttgacg
ttcttcgggtacgacgccgtgggcctggacgaggagtcggcgcacagcgcgctgctggag
cggctggcggcgctcggggcgaacacggcggcgtcgacggcggccgcgccgctgcgctgc
gggagcgtcgaggaggtgcagcgccgggtcgaggagatcgcggggatgcgggccgcgctg
ccgttcggcatcgacggcgtggtggtgaaggccgacgacgcggccgaccagcgggaggcc
ggttccggttcgcgggcgccgcgctgggcggtggcccgcaagctcgccgcggagcacaag
gtgaccaggctgctgggcgtggagtgggcggtcggccggacgggcgtcatcgcgccgcgc
gccgtgctggagccggtggtgatcgacggcgtgacggtgtcgttcgcgacgctgcacaac
ccggcggacatcgagcggcgcggcctgatgctgggcgaccgggtcttcgtctaccgcgcg
ggggacgtcatcccccgggtggaggccccgctggtggcggagcgcaccggcgcggagcag
ccgatcgtcttcccgaccgcctgcccgcgctgcggggaggcgatcgacaccggcgagcag
cgctggcgctgcgtgcgcggccgcaactgccaggcggtggcgtcgatcatctacgcggcg
ggccgcgaccagctggacatcgagggcctgggctcgacccgggcggtgcagctggtggag
gccggtctggtccgcgacctggcggacgtgttcacgctgacccgcgagcagttgctctcg
ctggagcggatgggcgccaccagcaccgacaacctgctggcggcgatcgccaccgcccgc
acccgtccgctgaaccgcgtgctgtgcgcgctgggcgtgcgcggcaccgggcgcagcatg
tcgcggcggatcgcggcgcacttcggttcgatggcggcgatccggtcggcggacgcggag
accctggccgccgtggagggcatcggcccggagaaggcccgcctggtcgtctccgaactc
gccgagctgtcggccctgctggaccggctgaccgagctcggcgtgggcgtccaggtcacc
gagccgaccgctcccgtgctcgtcctggcggccggcgcggccggggcggccgagggcacg
gagggcacggagggcgccggggtgcccgtcggcggtccgctggccggtgaggcggtggtg
gtgacgggcagcatgaccggcccgctggccgcgctgtcccgcaacgaggtgaacgagctg
atcgagcgggccggcggcaaggcgtcgtcctcggtctccaagcgcaccacgctgctggtg
gccggggagaaggccggttcgaagcgggcgaaggccgaggagctgggcatccgcgtgctc
gccccggaggagttcgccgcgctggtcgccgagcacctgcccgtcgcggtctga
DBGET
integrated database retrieval system
