Kitasatospora sp. MMS16-BH015: CFP65_5746
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Entry
CFP65_5746 CDS
T05366
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
kit
Kitasatospora sp. MMS16-BH015
Pathway
kit03030
DNA replication
kit03410
Base excision repair
kit03420
Nucleotide excision repair
kit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFP65_5746
03410 Base excision repair
CFP65_5746
03420 Nucleotide excision repair
CFP65_5746
03430 Mismatch repair
CFP65_5746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kit03032
]
CFP65_5746
03400 DNA repair and recombination proteins [BR:
kit03400
]
CFP65_5746
Enzymes [BR:
kit01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CFP65_5746
DNA replication proteins [BR:
kit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CFP65_5746
DNA repair and recombination proteins [BR:
kit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CFP65_5746
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFP65_5746
MMR (mismatch excision repair)
DNA ligase
CFP65_5746
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CFP65_5746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_5
HHH_2
BRCT
PTCB-BRCT
HHH
UPF0758_N
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
AUG80433
UniProt:
A0A2H5B7S1
LinkDB
All DBs
Position
complement(6770107..6772167)
Genome browser
AA seq
686 aa
AA seq
DB search
MTTDTTPLPSPAAYAAAVSSAVRAATAYYTDGSTPLGDDEYDALLRAILAYEQEHPDEVL
PESPSGKVAGGSVQGDVPHSVPMLSLDNVFSDEELAEWAAGLERRLGRPVAAWCVEPKLD
GLAVAARYQGGQLVQLLTRGDGLAGEDITHAAEAVLGLPATLAEPLDLELRGEVLLTTAQ
FDEANRIRTEHGATPFAHPRSGAAGTLRAKDRPYRIELTFFAYGAVGLDHLDHSALLEAL
AALGAHTAAGTPAAPLRCADLAQVGQRIAAITALRSALPFGIDGVVVKADAGADQQAAGS
GSRAPRWAVARKLAAEHKVTRLLAVEWNVGRTGIIAPRAVLEPVVIDGVTVTYATLHNPA
DITRRGLMLGDQVFVYRAGDVIPRVEAPLADQRTGAETEIVFPEACPRCEDAIDSSEQRW
RCVRGRACQAVASVRYAAGRDQLDIEGLGGTRAVQLVESGLVSDLADLFTLTKEQLLTLD
RMGEVSADNLLAAIETARGAALHRVFCALGVRGTGRTMSRRIAAHFGSLAAIRAADADTL
AEVDGIGPEKARLISAELLSLAPLLDRLAAQGVGTQVAEPQRTAAVAAEGDGETVGAGPL
AGPLTGETVVVTGSMTGPLAALSRTEVNELVERAGGKSSSSVSQRTTLLVAGEKAGSKRA
KAESLGIRILSPEEFAELVADHLPSA
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggacaccacgcccctgccctcccccgccgcctacgccgccgcggtcagctcc
gcggtgcgggccgccaccgcgtactacaccgatggcagcacgcccctgggcgacgacgag
tacgacgcgctgctgcgtgccattctcgcgtacgagcaggagcaccccgacgaggtgctg
cccgagtcaccgagcggcaaggtggccggcggctccgtccagggcgacgtgccgcactcg
gtgccgatgctctcgctggacaacgtgttctccgacgaggagctggccgagtgggcggcc
ggtctggagcgccggctcggccggccggtggccgcctggtgcgtggagcccaagctggac
ggcctggccgtcgccgcccgctaccagggcgggcagttggtgcagctgctgaccaggggc
gacggcctggccggcgaggacatcacgcacgccgccgaggcggtgctcggcctgcccgcc
accctcgccgagccgctcgacctcgagctgcgcggcgaagtcctgctcaccaccgcccag
ttcgacgaggccaaccggatccgcaccgagcacggcgccacccccttcgcccacccgcgc
agcggcgcggccggcaccctgcgcgccaaggaccgcccgtaccggatcgagctgaccttc
ttcgcctacggcgccgtcggcctcgaccacctcgaccacagcgccctgctcgaagctctg
gccgcgctcggcgcgcacaccgccgccggcaccccggcggccccgctgcgctgcgccgac
ctcgcgcaggtcgggcagcggatcgcggcgatcaccgcgctgcgcagcgccctgccgttc
gggatcgacggcgtggtggtcaaggccgacgccggagccgaccagcaggcggccggctcc
ggctcgcgcgcgccccgctgggcggtggcccgcaagctcgccgccgagcacaaggtgacc
cggctgctcgcggtggagtggaacgtgggccgcaccggcatcatcgccccgcgcgccgtg
ctggagccggtggtgatcgacggcgtcaccgtcacctacgcgaccctgcacaacccggcc
gacatcacccggcgcggcctgatgctcggcgaccaggtcttcgtctaccgcgcgggcgac
gtgatcccccgggtcgaggccccgctggccgaccagcgcaccggcgccgagaccgagatc
gtcttccccgaggcctgcccgcgctgcgaggacgcgatcgacagctccgagcagcgctgg
cgctgcgtgcgggggcgggcctgccaggccgtggcctcggtgcggtacgcggccggccgc
gaccagctcgacatcgagggccttggcggcacccgcgccgtccagctggtggagagcggc
ctggtgagcgatctcgccgacctcttcaccctcaccaaggagcaactgctcaccctggac
cggatgggcgaggtgagcgccgacaacctgctcgccgcgatcgagaccgcccggggtgcg
gccctgcaccgggtgttctgcgccctcggcgtccggggcaccggccggacgatgtcccgc
cggatcgccgcccacttcggttcgctggccgccatccgcgccgccgacgccgacaccctc
gccgaggtcgacggcatcggccccgagaaggcccgcctgatctccgccgaactcctctcc
ctggcaccgctgttggaccgcctggcggcccagggcgtcggcacccaggtggccgagccg
cagcgcaccgcagcggtggcggccgagggcgacggggagaccgtcggcgcaggtccgctc
gccggcccgctcaccggcgagacggtggtggtcaccggctcgatgaccggccccctcgcc
gccctctcccgcaccgaggtgaacgaactcgtggagcgggccggcggcaagtcctcctcc
tcggtctcccagcgcaccaccctcctggtggccggcgagaaggccggctccaagcgggcc
aaggccgagtcgctgggcatccggatcctctcccccgaggagttcgccgagctcgtcgcc
gaccacctcccgtccgcctga
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