KEGG   Klebsiella sp. M5al: BWI76_27410
Entry
BWI76_27410       CDS       T09148                                 
Name
(GenBank) DNA ligase B
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
klm  Klebsiella sp. M5al
Pathway
klm03030  DNA replication
klm03410  Base excision repair
klm03420  Nucleotide excision repair
klm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:klm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BWI76_27410
   03410 Base excision repair
    BWI76_27410
   03420 Nucleotide excision repair
    BWI76_27410
   03430 Mismatch repair
    BWI76_27410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:klm03032]
    BWI76_27410
   03400 DNA repair and recombination proteins [BR:klm03400]
    BWI76_27410
Enzymes [BR:klm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BWI76_27410
DNA replication proteins [BR:klm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BWI76_27410
DNA repair and recombination proteins [BR:klm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BWI76_27410
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BWI76_27410
   MMR (mismatch excision repair)
    DNA ligase
     BWI76_27410
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BWI76_27410
SSDB
Motif
Pfam: DNA_ligase_aden OB_DNA_ligase HHH_5 HHH DUF3701 Nlig-Ia YycE-like_C RNA_ligase
Other DBs
NCBI-ProteinID: ARI11028
LinkDB
Position
complement(5687041..5688717)
AA seq 558 aa
MQKGVWALVLWMLVGYGQAACPAWPQAKAEQEMERLGQRITEWNNAYWQQGSSTVSDEVY
DQLAARLAYWQRCFTGETPAHSALPPLRGDTRHPVAHTGVRKLANQADVARWMRGQSGLW
VQPKVDGVAITLVYRQGRLTQAISRGNGLTGEDWTARVLQIPSIPKTSDGVLANSVLQGE
LFLLREGHVQKRMGGMNARSKVAGMMMRQEAQAELDRLGIFIWAWPDGPEDMEQRLALLR
QGGFLYSTLFSHPVADAQQVERWRQRWLTSPLPFATDGVVVRRAKESAGRYWAPGQGDWV
IAWKYPPASRVMEVRGISFSVGRSGKIAVVALLEPQLLDDKRVQRVNVGSVSRWYNLDIG
VGDQLQISLAGQGIPRIDSVVWRTAQRNKPQPPAARFNALTCYFATPECAEQFLSRLVWL
SSRSVLDIDGAGEALWRTLHDARSMEHLFSWLAFTPERLQSIPGISAQRGQRLWHQFNLA
RERPFLRWIQAIGVPIPKMAFAGLKEDDWRRMQDRNEEQWRRLPGIGAERARQLVTFLHH
PDVAALAKWLSGQRVPGF
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgcaaaaaggagtctgggcgctggtgctgtggatgctggtgggatacgggcaggcagcc
tgccccgcgtggccgcaggccaaggctgaacaggaaatggaacgtctcggtcagcggata
acggaatggaataacgcctactggcagcaggggagcagtacggtaagcgatgaagtctat
gaccagcttgcggcgcggctggcatactggcagcgctgcttcaccggcgagactcccgct
cactctgcgcttccgccgctaaggggggataccagacatccggtggcgcacaccggcgtg
cgtaaactggcgaatcaagccgacgtggcgcgctggatgcgtggccagtccggcctgtgg
gtacagccgaaagtcgatggcgtcgcgatcacgctggtgtatcggcaggggcgtttgacg
caggccataagccggggtaacggcctgaccggggaagactggacggccagggtcttgcag
atcccctcaattcctaaaacctctgacggcgtactggcgaatagcgtgctgcagggtgag
ctgttcctgctccgcgaggggcatgtacaaaagcgaatgggcggcatgaacgcgcggtca
aaagtagccggcatgatgatgcgccaggaggcgcaagcggaacttgataggctgggcatc
tttatctgggcgtggcccgatggtccagaggatatggaacagcggctggcgctgctgcgg
cagggcggctttctttacagcacgcttttttcgcatccggtcgcggatgcgcagcaggtt
gaacgatggcgccagcgttggttgacttcaccgctgccttttgccaccgatggcgttgtg
gtgcggcgggcaaaagagtccgccgggcgttactgggcgccgggtcagggcgattgggtt
atcgcctggaaatacccgcctgcctcgcgggttatggaggttcgcggtatcagctttagc
gtcgggcgcagcggtaaaatagccgtggtggcgctcctggagccgcagctgctggacgat
aagcgcgtgcagcgggtgaacgtcggctcggtatcccgctggtacaatctggacatcggt
gttggcgatcagctgcaaatcagccttgccgggcaggggataccgcgcatcgattcggtc
gtctggcgcacggctcagcgtaataaaccccagccaccggcggcgcgtttcaatgcctta
acctgctacttcgccacccccgagtgcgcggagcagtttctctcgcggctggtctggctc
tcatcccgatcggttctcgatattgacggcgcgggggaagcgctatggcgaactctgcac
gatgcccgcagcatggagcatctcttttcatggctggcgtttacgccggagcggctgcaa
tccatcccgggcatctctgcgcagcgcgggcagcggctgtggcatcagtttaaccttgcg
cgcgaacggcctttcctgcgctggatacaagcaatcggcgtgcccataccgaagatggca
tttgccgggctgaaggaggatgactggcgacggatgcaggatcgcaacgaagagcagtgg
cgacgcctgccgggtatcggagcagaacgagcgcggcagctggtgacgttcttacatcat
ccggatgttgccgcgctagcgaagtggctgagtgggcaacgcgttccgggattctga

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