Pantoea rwandensis: LH22_15740
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Entry
LH22_15740 CDS
T03331
Symbol
rumB
Name
(GenBank) 23S rRNA methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kln03009
]
LH22_15740 (rumB)
Enzymes [BR:
kln01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
LH22_15740 (rumB)
Ribosome biogenesis [BR:
kln03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LH22_15740 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
Methyltransf_25
Cons_hypoth95
Methyltransf_12
Methyltransf_32
Methyltransf_11
TehB
UPF0020
Motif
Other DBs
NCBI-ProteinID:
AIR86843
LinkDB
All DBs
Position
complement(3346804..3347940)
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AA seq
378 aa
AA seq
DB search
MYCALYDAGRCRSCQWLEKPYPQQLSEKQSLLEQLLSQTAVAEYLPPVTSPLQGFRNKAK
MVVSGSVERPIFGMMARDGEPVDLCDCPLYPASFAPVFDVLKPFIARAGLTPYNVARQRG
ELKFLLLTESSQGGMMLRFVLRSTRKLEQLRAALPWLQQQLPQLKVISANIQPVHMAILE
GEEEIALTPDQALAECFNQVPLYIRPQSFFQTNPQVAADLYATARDWVAELPVTSMWDLF
CGVGGFGLHCATPEMQLTGIEINAEAIACAQQSAEQLGLDKVSFAALDSTRFATSHEQVP
QLVLVNPPRRGIGAELCAYLSEMAPDYILYSSCNPTTMAQDIARLADYAVSRVQLFDMFP
HTAHFEVLTLLIKKGGAT
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtattgcgcgctttatgatgccggtcgctgtcgttcatgccagtggctggagaaaccc
tatccgcagcagctcagcgagaagcagtcgctgctcgagcagttgctgtcgcagactgcg
gtggcagaatatttaccgccggtgacctcgccgctgcagggttttcgtaataaagccaaa
atggtggtgagcggcagcgtcgaacggccgattttcggcatgatggcgcgtgatggcgaa
ccggtggatctgtgtgattgcccactctatcccgccagctttgcgccggtgtttgatgtg
ctaaaaccctttattgcccgcgctggattgacaccctacaacgtggcgcgtcaacgcggc
gaactgaaattcctgctgcttaccgagagttcgcaaggtgggatgatgctgcggtttgtg
ctgcgatccacccgcaagctggagcagttgcgcgcggctttaccctggttgcagcagcag
ttgccgcagttaaaagtgatctccgccaatatccagccagtacacatggcgattttggaa
ggggaagaagagattgctttgacgcccgatcaggcactggcagaatgtttcaatcaggtc
ccgctgtatattcgtccgcagagtttctttcagaccaacccgcaggtcgcagcagatttg
tatgccacggcgcgtgattgggtcgcagagttgccggtgaccagtatgtgggatctgttc
tgcggcgtgggcggtttcggtttgcactgtgccacgcctgaaatgcagctgaccggtatt
gaaatcaatgcggaagccattgcctgtgcgcagcaatcggctgaacagttggggctcgat
aaagtgagtttcgccgcgctggattccacccggttcgcgacatcgcatgaacaggtgcca
cagctggtgctggttaatccgccgcgtcgcggtattggggctgagctgtgtgcttatctc
agtgaaatggcgccagactacattctctattcaagctgcaatcccactacgatggcgcag
gatattgcacgcctggcagattacgcggtgagccgcgtccagctgtttgatatgtttcca
cacaccgcacactttgaagtgctaacgctgctgattaagaagggtggagccacgtag
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