Klebsiella huaxiensis: DA718_07950
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Entry
DA718_07950 CDS
T05915
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
klw
Klebsiella huaxiensis
Pathway
klw03030
DNA replication
klw03410
Base excision repair
klw03420
Nucleotide excision repair
klw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
klw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DA718_07950 (ligA)
03410 Base excision repair
DA718_07950 (ligA)
03420 Nucleotide excision repair
DA718_07950 (ligA)
03430 Mismatch repair
DA718_07950 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
klw03032
]
DA718_07950 (ligA)
03400 DNA repair and recombination proteins [BR:
klw03400
]
DA718_07950 (ligA)
Enzymes [BR:
klw01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
DA718_07950 (ligA)
DNA replication proteins [BR:
klw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DA718_07950 (ligA)
DNA repair and recombination proteins [BR:
klw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
DA718_07950 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DA718_07950 (ligA)
MMR (mismatch excision repair)
DNA ligase
DA718_07950 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DA718_07950 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
RNA_ligase
DZR_2
Motif
Other DBs
NCBI-ProteinID:
QBG07131
LinkDB
All DBs
Position
1651226..1653250
Genome browser
AA seq
674 aa
AA seq
DB search
MESNEQKLTELRTTLRHHEYLYHVMDTPEIPDAEYDRLMRELRELEAQHPELITPDSPTQ
RVGAAPLASFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNTDDLTYCCELKLDGLA
VSILYENGVLVQAATRGDGTTGEDITSNVRTIRAIPLKLRGDDIPQRLEVRGEVFLPQAG
FEKINDEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPESHS
ARLQQFKAWGLPVSERVKLCHTPEEVLTYYRKVEEDRPNLGFDIDGVVIKVDSLALQEQL
GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN
ADEIDRLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEKTREIVFPTHCPVCHSDVERVEG
EVVTRCTGGLICGAQRKEALKHFVSRRALDVEGMGDKIIDQLVEKEYVHTPADLFQLTPG
KLTGLDRMGPKSAQNVVDALEKSKETTFARFLYALGIREVGEATAAGLAAHFGTIEALEQ
ASIEELQKVPDVGIVVATHVRNFFAEESNREVIVQLRKEGVRWPAPVVVNAEEIDSPFAG
KTVVLTGSLSQLSRDDAKAQLVALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIAVI
DEAEMVRLLGESRG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgaacgaacaaaaactgactgaactgcgaaccacgcttcgccatcatgaatat
ctgtaccatgtcatggatacaccggaaattcctgatgcggaatacgatcggttgatgcgt
gaattacgtgaactggaagctcaacatcctgaactgattacgcctgattcacccactcag
cgcgttggcgctgcgcctctggcctcatttagccagattcgtcatgaagtgccaatgttg
tcgttggataacgtttttgatgaagagagcttcctcgcgtttaataagcgcgttcaggac
cgtctgaaaaatactgatgatctgacttactgttgtgaactgaagctggatggcctggcg
gttagcatcctgtatgaaaacggcgttctggtgcaggcggcgacccgaggcgatgggacc
accggagaagatattacctccaacgtacgcaccattcgcgccatccccctgaagctgcgt
ggtgacgatattccgcagcgtctggaagttcgcggcgaggtatttctcccgcaggccggg
tttgaaaaaattaatgatgaggcgcgtcgcaccggtgggaaagtgtttgctaacccacgt
aacgcggccgccggttctttgcgccagctcgatccgcgaattacggcgaagcgaccgctc
actttcttttgctacggcgtgggtgtgctggaaggtggtgagctgccggaaagccattct
gcgcgtttacagcagtttaaggcctgggggctgccggtcagcgagcgcgtaaaactctgc
catacgccagaggaagtgcttacttactatcgcaaagttgaggaagatcgtccgaacctg
ggctttgatatcgacggcgtggtcatcaaagttgattctttggctctacaggaacagctt
ggttttgtggcccgcgcgccgcgttgggcggtggcgtttaagtttccggcgcaagagcag
atgacctttgttcgtgatgtcgagtttcaggtcgggcgtaccggtgccatcacgccagtt
gcccgtctggagccggtccatgtcgcaggagtgctggtcagcaacgcgacgctgcacaat
gcggatgaaatcgaccgcctggggttgcgtatcggcgataaggtggtcattcgtcgtgcc
ggagatgttatccctcaggtggtgaacgtggtcctttcagagcgtccggaaaagacccgt
gaaatcgtgttccccacgcattgcccggtatgccattccgatgttgaacgtgtggaaggt
gaagttgtcacgcgctgtactggcggtctgatttgcggcgctcagcgtaaagaagcgctc
aaacatttcgtttctcgtcgcgcgttagatgtcgagggaatgggcgataaaatcatcgac
cagctggttgagaaagagtacgtccatacgccagccgatcttttccagttgacgccgggt
aaactcactggactggaccgcatggggccaaaatcagcgcagaacgtggtggatgctctg
gaaaaatcgaaagaaacgacctttgcccgtttcctttatgcgttagggatccgcgaagta
ggcgaagccacggcagcaggtttggcggcccactttggtaccattgaggcgctggagcag
gcatcgattgaagagctgcaaaaagtgcctgatgtcgggattgttgtcgccacacacgtg
cgcaatttctttgctgaggagagtaaccgcgaagtgattgttcagttgcgcaaagaaggg
gtccgctggcctgcgccggtagtggtcaatgccgaagaaattgatagcccatttgccgga
aaaacggtggttctgaccggtagcctgagccagctatcgcgcgatgatgctaaagcgcag
ctggtcgcgctgggcgcgaaggttgcgggcagcgtatcgaagaaaaccgatctggtgatt
gccggagaagcggcaggttccaaactggctaaagcacaggaactgggcattgcggtgata
gatgaagctgaaatggtgcgtctgctcggagaatcgcgtggataa
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