Kryptolebias marmoratus (mangrove rivulus): 108230074
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Entry
108230074 CDS
T05608
Name
(RefSeq) filamin-C isoform X1
KO
K27393
filamin-C
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108230074
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
kmr04812
]
108230074
Cytoskeleton proteins [BR:
kmr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108230074
Intermediate filaments
Intermediate filament-binding proteins
108230074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Big_3_5
Y_Y_Y
CFSR
CH_2
Motif
Other DBs
NCBI-GeneID:
108230074
NCBI-ProteinID:
XP_017261427
LinkDB
All DBs
Position
LG11:10733192..10756628
Genome browser
AA seq
2744 aa
AA seq
DB search
MMSNNYGDDQLPPQYYQATDFGEEEEDEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKC
VNKTITDLQKDFSDGLKLISLLEVLSQKKMYRKHHVRPNFRQMKLENVSVALEFLDREHI
KLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDDEDDEETKKLTPKQRLLGWIQNK
VPQLPINNFNRDWRDGKALGALVDNCAPGLCPDWAEWDPNQPVQNAKEAMQQADDWLGVP
QVIAPEEIVDPDVDEHSVMTYLSQFPKAKLKPGAPLKPKQLFPDKVKAYGPGIEPHGNKV
LQPAVFTVETFEAGSGEVLVFVEDPEGHKEEAKVKPNKDKNRTYTVTYVPKVEGVHKVKV
LFAGQDIDKSPYTVNVTKVMGDPSKVHARGPGLEPTGNVANKPTYFDIYTAGAGHGDVSV
VIVDPQGKKDTVELMLENKGDSVFRCTYRPVQEGPHTIHVLFAGQEIPRSPFPVNIAEAP
AVAPPVGAPLQIAPQSVRTPPGAKGGTGAPPAKPGRPTTNPNACRATGRGLQPKGVRVKE
VADFKVFTKGAGSGPLNVSVKGPTGAEEQVKVRDAGNGVYECEYYPLKPGKYTVTITWGG
QPIPRSPFEVEVGKEASVQKVRAWGPGLKTGMVGKSADFVVEAIGTEVGTLGFSIEGPSQ
AKIECDDKGDGSCDVRYWPTEPGDYAVHVICDDEDIKDSPFMAHILPAVNDVFPEKVKAY
GPGLKPTGVIVNKPTEFTIDARMAGNGHLKIYAQDAEGCTINIKITDKGDGTFLCVYTPV
KPIKHTIIITWGEVNVPNSPFRVLVGEGSHPDKVKVHGPGVEKTGLKANEPTYFTVDCSE
AGQGDISIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYTPPGPGRYTIMVLFADQEIP
ISPFKVKVDPSHDAGKVRAEGPGLNKTGVEVGTPTHFTIYTKGAGKAKPEVRFATSGPGE
AVRDFEIIDNHDYSYTVKYTALQQGNMAISVTHGGDPIPKSPFHITVAPALDIGKVKVDG
LDTKVEVGKDQEFTVNTKGAGGQGNVGVKMTSPSGRPIPCKMESDKAKGTHGVKYIPPEE
GQYKVDVSYDGNPVMGSPFGVEAVIPADPSKVKAFGPGLKGGTVGKPAPFTIDTKGAGAG
GLGLTVEGPCEAKIECQDNGDGTCSVSYLPTEPGEYAINILFAEQHITGSPFKAAIRPAF
DPSKVTATGPGLERAKAGEPATFTVDCTRAGDAELTIEIVSETGVKAEVHIQKTSEGSFS
VTYIPSFQGAHTITIKYGGHMIPYFPKVLQVEPSVDTSGVHVYGPGVEPRGVLREVTTHF
IVDARALNKVGGGHVKVHIINPSSANTDSYITDKGDGTYRVEYTAFEDGMHMIEVVYDGA
PVPKSPFRVFVVEGCDPTRVRAYGPGLEGGVTNKSNCFTVETRGAGTGGLGLTIEGASEA
KISCKDNKDGSCSVEYVPFTPGDYDVNITYGGQPIPGSPFRVPVKDPVDPSKVKCSGSGL
GAGVRAHVPQTFTVDCTQAGQAPLDVKLYGPTGSVEPVGVKNNGDGTHTVHYTPAQDGPY
TVAVKYADQEVPHSPFKVMSQPGHDASKVRASGPGLDTKGVSASLPVEFTIDARDAGEGL
LTVQILDPEGKPKNATIQDNRDGTYTVSYVPDSTGPYTITIKYGGDEIPYSPYHIQSLPT
GDASKCLLTVSIGGHGMSSLQKLQTSEDTVITVDAKAAGKGKVTCKVLTPQGMELDMDVV
ENHDGTFDIYYTAPEPGKYVITIRFGGQNIPKSPFNVMATNEQVVPRDTVDPLFRPVNFL
VPFTPQQGEITGEVRMPSGKTSRPHITDNKDGTITIKYQPTERGLHEMDIKYDGNHIPGS
PLQFYVDAVNSGVVTAYGPGLSYGTVNKAATFTVVTKNAGEGGLSLAVEGPSKAEITCKD
NKDGTCTVSYLPTAPGDYNIIVKFDNKHIPGSPFTAKITGDDTITRTSQLNVGTAADVSL
KIAETDLSSLTASIRAPSGNEEPCLLKRLPNRHLGISFTPKEVGEHEVSVRKNGKHVANS
PFKIMVGQSEIGEASRVKAFGKGLVEAHTFEMAEFFVDTRNAGYGGLALSIEGPSKVDIN
CEDVEDGTCRVTYCPTEPGNYTVNIKFAEKHIPGSPFTVKVTGEGRIKESITRKRQASSI
ASVGSTCGLNLKIPGNWFQMVSAQERLTRTFTRSSHTYTRTERTEISKTRGGETKREVRV
EESTQVGGGGSPFRDVFGDFLGRESLSSFAGITARPEVESGSQVMTAQVTSPSGKTVDAD
IMDGGSSTYSVRFIPQEIGPHTVNVKYRGQHVPGSPFQFTVGPMGEGGAHKVRAGGTGLE
RGVAGAPSEFSIWTREAGAGGLSIAVEGPSKAEISFEDRKDGSCGVSYIVKEPGDYEVSI
KFNNEHIPDSPFIVPIATLSDEARRLTVTSLQEKDLKVNQEASFMVQRNGARGVVDAKVH
RPSGSSEECYVSELDSDKSAIRFIPRENGVHSIDVKFNGCHIPGSPFNVRVGDPGMVGDP
GMVTAHGAGLQGGTTGVPSEFVVNTSNAGSGTLSVNIDGPSKVKMDCRECLEGYRITYTP
MAPGNYLITIKYGGPQHIVGSPFKARITGQRLSGGHSLHETSSVLVETVTKSSKIGGAYS
SSSSTSSAKLTSDASKVVCRGAGLSKALVAQKNTFTVDCSKAGTNMLMVGVHGPQTPCEE
VYVKHMGNKLYNVTYTVKDKGSYTVIVKWGDDNVPGSPYKVAVP
NT seq
8235 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaacaactacggcgacgaccagctgcccccgcagtactaccaggccacggac
ttcggcgaagaggaggaggacgagatgcccgccacggagaaggacctggccgaagatgcg
ccctggaagaagatccagcagaacaccttcaccaggtggtgcaatgagcacctcaagtgc
gtgaacaagaccatcaccgacctgcagaaggactttagcgatgggctgaagctcatttcg
ctcctggaggtgctgagccagaagaagatgtaccggaagcatcacgtcaggcccaacttc
cggcagatgaagctggaaaacgtatctgtggcgctggagttcctggacagggagcacatc
aagctggtctcaatagatagtaaagccattgtggacgggaatctgaagctgatcctcggt
ctcatatggactctcatcctgcactactccatttccatgccgatgtgggacgatgaagac
gacgaggagacgaaaaagctgacgcccaaacagcgcttgctgggctggatccagaacaag
gtgccccagctgcccatcaacaacttcaaccgtgactggcgagatgggaaggccctcgga
gctctggttgacaactgtgcccccggtttgtgccccgactgggcggagtgggaccccaat
cagcccgtgcagaatgccaaagaagccatgcaacaggctgatgactggctgggtgtgcct
caggtgattgcccctgaggaaatcgtggacccagatgtggatgagcactcagtcatgacg
tatttgtctcagttccccaaggccaaactgaaacctggggctcctctcaaaccaaaacag
ctttttccagacaaggtcaaagcctatggaccaggtatcgaaccacatggcaacaaagtt
ctgcagccggctgtgttcacggtggaaactttcgaggccggcagcggtgaagtcttggtg
tttgtggaggatcctgagggacacaaagaggaggctaaagttaaacccaacaaggacaaa
aacagaacctacactgtcacctacgttccaaaagttgagggtgtccacaaggttaaagtg
ctgtttgcaggtcaggacattgacaagagtccatacacagtgaatgtgacgaaggtgatg
ggcgacccaagcaaagtccacgcaaggggtccgggtctggagccgacagggaatgtggcc
aacaagcccacctactttgacatctatactgctggtgctggtcatggcgacgtcagcgtg
gtcatcgtcgaccctcagggtaaaaaggacacggtggagctcatgctggagaacaaaggg
gacagtgtcttccgctgcacctatcgccccgtgcaggaggggcctcacaccatccatgtc
ctgttcgcaggccaggagatccccaggagccctttccctgtcaacatcgctgaggctcca
gcagttgctcctcccgtgggagcaccactgcagatagctcctcagtcagtccgcacccct
cctggagcaaagggtgggacgggggctccccccgcaaaacctggccgtccaaccacgaac
ccaaacgcttgcagagccactggaagagggcttcagcctaaaggtgtgagagtgaaggag
gttgcagacttcaaagttttcaccaaaggagctggcagcggtccactaaatgtctcagtc
aaaggaccaactggagcagaggagcaagtgaaagtgcgagatgcgggaaatggagtgtac
gagtgtgaatattaccctcttaagcctggtaaatatacagtgaccatcacctggggaggc
cagcccatcccacgcagtccctttgaagtggaggtgggtaaagaagcaagtgttcagaag
gtgagggcctggggtcctggtctgaagaccggcatggtgggaaaatctgctgattttgtg
gttgaggccataggcactgaagttggaactctgggcttctccatcgaaggcccatcgcag
gctaaaattgagtgtgatgataagggtgacggctcctgcgatgtgcgttactggcccacc
gagcctggggactatgctgtccacgtcatttgtgatgatgaagacatcaaggacagtcct
ttcatggcccacattctacctgctgtcaatgatgttttccctgagaaagtaaaagcctac
ggacctggcctaaagccgactggtgtcattgtaaacaaaccaactgagttcaccattgat
gctcgcatggctgggaatggtcacctcaagatctatgcacaggacgctgaaggttgcact
atcaacatcaagatcactgacaaaggggatggcacatttctgtgtgtgtacactcctgtt
aaacccattaaacacaccatcatcatcacctggggggaggtcaacgtgcccaacagcccc
ttcagggtgctggttggagagggctctcatcctgataaagtcaaggtccatgggcccgga
gtagagaagacggggctcaaagctaacgagccgacatacttcactgtggactgcagcgaa
gcgggtcaaggagacatcagcatcggaatcaagtgtgccccgggggtggtcggaccggcc
gaggctgacatcgactttgacatcatcaagaatgacaatgacaccttcactgtcaagtac
actccccccggtccgggacgatacaccatcatggtgctgtttgctgaccaggaaattcca
atcagtcctttcaaagtcaaggtggatccttcccatgatgctggtaaggtgagagcagag
ggtcctggactcaacaagacaggtgtggaggtgggaactccaacccatttcaccatttac
acaaagggagctggaaaagccaagcctgaggtgcgttttgcaacatcaggcccgggagag
gcagttcgtgactttgagatcatcgataaccatgattattcctacactgtcaagtacacg
gctcttcaacagggcaacatggctatttctgtgactcatggaggagatcccatacccaaa
agcccctttcacatcacagtggcaccagctctggatattggaaaggtgaaagtggatgga
ctggacaccaaagtggaggttggaaaggatcaggagttcacagtgaatacgaagggcgcg
ggtgggcagggcaatgtaggtgtgaagatgacttctccctctggccgaccaatcccatgc
aagatggagtcggacaaagccaaaggcactcacggtgtgaagtacatccccccagaggag
ggacagtacaaggtggatgtcagctacgatgggaaccctgtgatgggaagcccctttgga
gttgaagcagtcataccagctgatccttcgaaggtaaaagcctttggcccaggcctgaag
ggtggaacagtgggtaaaccagctccattcaccatcgacacaaagggagctggtgcgggc
gggcttggcctgacagtggagggtccctgcgaggcgaaaattgagtgccaagacaacggc
gatggcacctgctctgtgtcctaccttcccactgagcctggtgagtacgccatcaacatc
ctgtttgcagagcagcacatcactggctccccgttcaaagctgcaattcgcccagccttt
gatcccagcaaagtaacagctaccgggccaggcctggagagggccaaggcaggtgaacca
gcaaccttcaccgtggattgcaccagagcaggcgacgctgagcttaccatcgaaatcgtg
tcagagactggggtcaaagccgaggtgcacatccagaaaacttcagaggggagcttttct
gtcacctacatcccatcctttcaaggtgctcacaccatcaccatcaaatatggtggccac
atgatcccctactttcccaaagtcctgcaggtggaaccctcagtggacaccagcggagtt
catgtctacggacctggagtggagcccagaggagtcctgagggaagtcacaacccacttc
attgttgatgcgcgtgccctcaacaaggttggaggcggtcatgtaaaggtccacattatc
aacccctccagcgccaacaccgactcctacattactgacaagggcgacggcacttacagg
gtggagtacacagcctttgaggatggaatgcatatgattgaagttgtctacgatggagca
cctgtgccaaaaagtcccttcagagtgtttgtggtcgaaggatgtgatccaactcgggtc
cgtgcatatgggccaggactggaggggggagtaaccaacaagtcaaactgttttacagtg
gagacaaggggtgctggtacaggagggctgggtctaaccatcgagggagcctcagaggca
aaaatatcatgcaaagacaacaaagatggcagctgcagtgttgaatatgtccccttcact
cctggagactatgatgtaaatattacctatggaggtcaaccgatccctgggagtccattc
cgtgtgcctgtgaaggacccagtagatcccagcaaagtgaagtgctccggttcaggtctg
ggtgctggcgtgagggcccacgttcctcagactttcactgttgactgtacccaggctgga
caggccccactggacgtcaagctctacggaccaacaggtagtgtggagcctgttggagtg
aagaacaacggtgatggcacccacacagttcactacaccccagcacaggatggtccttac
acagtagcagtcaaatatgcagatcaggaagtcccacacagtccattcaaggtaatgtct
cagcctgggcatgatgccagtaaggttcgcgccagtggccctggtctagacaccaaaggt
gtttctgccagcctgcctgtagagtttaccattgatgctcgtgatgcaggagagggactg
ctcactgtgcagattctggatccagaaggcaagccgaagaatgcgaccatccaggacaac
agagatggaacctacaccgtgtcctatgtgcctgactctacaggcccctatacgatcact
attaaatacggaggagatgagattccctactccccatatcatatccagtccctgcccaca
ggagacgctagcaaatgtctcctaactgtttccatcggaggacatggcatgtcaagtctc
cagaagctgcagacctcagaggatacagtcatcacagtggatgccaaggcagccggaaaa
ggcaaggtgacctgtaaggtgctcactccacaggggatggagctggacatggatgtggtg
gagaaccacgatgggacctttgacatttactacacagctccagaacctgggaaatatgtg
attaccatccgctttgggggccagaacatcccaaaaagccccttcaatgtgatggccaca
aatgaacaggtggttcctcgcgatactgtggatcctctctttcgtcccgttaacttcctg
gttcctttcacgccacagcaaggagagatcacaggtgaggtgcggatgccttctggtaag
acctcccgcccacacatcaccgacaataaggatggcaccatcacaatcaaataccagccc
acagagagaggcctgcatgagatggacatcaaatatgatgggaaccacattccaggaagc
cctctgcagttctacgtggatgctgtgaacagcggagtggtgactgcttatggtccaggt
ctgagttacggaacagttaacaaagcagccactttcactgtggtcaccaagaatgcagga
gaaggtggtctgtcactggcagtcgagggtccttcaaaagctgagatcacttgtaaagac
aacaaagatggcacctgcactgtgtcctacctgcccacagctccaggagactacaacatc
atcgtcaaattcgacaacaagcacattcctggcagccccttcactgccaagatcactgga
gatgacactattaccagaacctcccagctcaacgttggcacagcagccgacgtgtctctg
aagatcgcagagactgatctgagctccctgactgccagtatcagagctccatcgggcaac
gaagagccctgcctcctcaagagactccccaacagacaccttggcatctctttcaccccg
aaggaggttggtgaacatgaagtgagcgtgaggaagaatggcaagcacgtagcaaacagt
ccttttaaaatcatggttggccagtctgagatcggtgaagccagcagggtgaaggctttc
gggaagggcctggtggaggcacacactttcgagatggcagaattttttgtggatacaagg
aatgcaggttacgggggtctggctttgtcaattgagggtccaagcaaagtcgatatcaac
tgtgaagatgtagaagatgggacgtgcagggtgacgtactgccctacagaacctggaaat
tacactgttaatataaagttcgcagaaaagcacatcccaggaagtcctttcacggtgaag
gtgactggagaaggaaggattaaggaaagtattaccaggaagagacaagcatcttctatt
gcctcagtgggcagcacatgtggtcttaacctcaagatcccaggaaactggttccagatg
gtttcagcccaggagaggctaaccagaacgttcacgcgcagcagccacacctacacccgc
actgagcgaacagaaatcagcaagacccggggtggggagaccaagagggaggtacgagtg
gaggagagcacccaggtgggaggaggggggagccctttcagagatgttttcggagacttt
ctgggcagagagagcctcagcagctttgctggcatcactgccagacctgaggttgaaagt
ggctctcaggtcatgacggctcaggtgaccagccccagcgggaaaacggtggacgccgac
atcatggatggagggagcagcacatacagcgtgcgcttcatcccacaggaaatcggacct
cacactgtaaacgtcaagtacagaggccagcacgtccctggaagccccttccagttcact
gtgggacccatgggtgaaggtggagctcataaggtccgtgcaggaggcaccggccttgaa
agaggcgtggctggagcaccttctgaatttagtatctggaccagagaggcaggagctggt
ggtctgtccattgcagtcgaaggtcccagcaaggctgaaatctcatttgaggacaggaaa
gatggctcttgtggcgtctcctacattgtgaaagaaccaggtgactatgaggtgtcaatc
aaattcaacaacgagcacatccctgacagcccgttcatcgttccaattgctacactgtca
gatgaggcccgcaggctcactgtgacaagccttcaggagaaggacctgaaggtaaaccag
gaggcctctttcatggtgcagcgtaacggcgcccgaggtgtggtcgacgccaaagttcac
agaccctctggctcgtctgaggaatgctacgtctctgagcttgacagtgacaagagtgcc
atccgcttcattccgcgggagaacggagttcactccatcgatgtcaagttcaatggatgc
cacattcctggaagccccttcaatgtgcgagtgggagatccggggatggttggagaccct
ggtatggtcactgcgcatggtgcgggactgcaaggaggaaccacaggcgtaccctccgag
tttgtggtcaacacctctaacgcaggctcaggcactctttctgtcaacatcgacgggccg
tccaaagtgaagatggactgtcgagaatgtcttgaaggctacaggatcacttacacaccg
atggcacctggcaactatctcatcaccatcaaatatggcgggccgcagcacatagtgggc
agcccgttcaaagccagaatcacaggccagaggctgtcagggggacacagcctccatgag
acctcctctgtcttggtcgaaactgttaccaagtcctccaaaatcggtggcgcctacagc
tcctcttcttccacctcctcagctaaactgacatctgacgccagcaaggtggtttgccgt
ggagcagggctgtccaaggctttggtcgcacagaaaaatactttcactgttgattgcagc
aaagcaggtaccaacatgctgatggtgggtgtgcacggtccccagactccctgcgaggag
gtgtatgtcaagcatatgggcaacaagctctataatgtcacctacaccgtcaaggacaag
ggcagttataccgtcatcgtcaaatggggcgatgataatgttcctgggagcccttacaaa
gtggctgtaccttaa
DBGET
integrated database retrieval system
