Kryptolebias marmoratus (mangrove rivulus): 108232078
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Entry
108232078 CDS
T05608
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D isoform X1
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04010
MAPK signaling pathway
kmr04020
Calcium signaling pathway
kmr04260
Cardiac muscle contraction
kmr04261
Adrenergic signaling in cardiomyocytes
kmr04270
Vascular smooth muscle contraction
kmr04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108232078
04020 Calcium signaling pathway
108232078
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
108232078
09153 Circulatory system
04260 Cardiac muscle contraction
108232078
04261 Adrenergic signaling in cardiomyocytes
108232078
04270 Vascular smooth muscle contraction
108232078
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108232078
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108232078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
FAM176
Motif
Other DBs
NCBI-GeneID:
108232078
NCBI-ProteinID:
XP_017265130
LinkDB
All DBs
Position
LG8:complement(9049024..9076596)
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AA seq
2074 aa
AA seq
DB search
MEAAKKDAPPVGDAGKSDTLGSTGSARKRGGGAKKAMQANKSALRAPRALCCLTLSNPIR
MAALALVEWKPFDIFILLAIFANCVAMGVTKPYPDDDSNATNHKLEQVEYVFLVIFTIET
FTKILAYGLVMHPSAYIRSGWNLLDFIIVIVGLFSVIAEGMTDHKPGEAHHAAGKPGGLD
VKALRAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIGMLVMFVIIIYAIIGLELFIG
RMHKTCFDIGTGLMVEDDPSPCAFAGVGRLCVENGTDCRGKWEGPNGGITNFDNVFFAML
TVFQCITMEGWTDVLYWMNDSIGFDIPWIYFVSLVIFGSFFIINLVLGVLSGEFSKEREK
AVARGELQKAQESKQMEEDMIGYMDWLIEAEDVDEEGNKRAAIAKKKMMKKFGWYKHSED
GGAESDSDDDIAYLDDDSGFCASLMAKMMANSFCDQLCQINHTLRKNCRVAVKTTNFYWL
VLLLVFLNTVASASEHYGQPKWLTEMQERANKILLLLFTLEMLMKMYAFGLQIYFMALFN
RFDCFVVCGGILETLLVEIDVIPPIGISVLRCIRLLRIFKMTRHWAALSDLVTSLLNSMK
AICSLLLLLFLFLIIFALLGMQLFGGKFNFDETQMKRSTFDSFPQALLTCFQILTGEDWN
AVMYDGIMAYGGPVFPNMVVCIYFVILFVCGNYILLNVFLAIAVDNLAGGGGKKKVEEKK
EEEEEWDEDEEKENEDEGNEEDDWQENEELRAIEGLEGVAPLKPEFSGPKEKIVPIPEGS
SFFILGKKNCLRVACHNLIHHPYFTNFILIFIILSSISLAAEDPIKSHSFRNIVLGYADY
VFTSVFTVEIVLKMTVYGAFLHTGSFCRNAFNLLDLLVVSVSLTSFFLHSSAISVVKILR
VLRVLRPLRAINRAKGLKNVVQCVFVAIRTIGNILIVTTLLQFMFACIGVQLFKGRFYSC
TDEAKHTPEECKGTFVVYKNGDMNHPMVKERVWENSDFNFDNVLMGMLALFTVSTFEGWP
LILYRAVDANAINRGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIITFREQGEAEFK
NCELNKNQRQCVYYALKAQPIKIYIPKNPSQLKFWRIINSSQFEYVMFVLILGNTLTLAV
QHYEQSKMFTSIMDILNMIFTVVFTIEMIIKLMALRAHHYFIDPWNSFDALIVVGSVLDI
AVSELSGGGGHGEGGKGEHGKVSITFFRLFRVLRLVKLLSKGEGIRTLLWTFVKSLQALP
YVGLLIAMIFFIYAVIGMQMFGKIAIDDNTEINRNCNFQTFFMAVLVLFRCATGEQWQEI
MLAALPGRRCDPESEIEPGEEFTCGSNLAYIYFISFFMLCAYLIINLFIAVIMDNFEYLT
RDWTVLGTHHLDEFKRVWSDYDPEATGRIKHIDVVTMLRRIQPPLGFGKLCPHRVACRRL
VAMNVPLHPDGTVTFNATLFALVRTSLKIKTEGPVDQQNEELKIIIKKLWKHTKPKLIDE
IIPPPRGDEVTCGKFYASFLIQDYFKKFRKRKERERKSKRKDRAAALQLGLRTLQDLAPE
MRLAMACDLEEEEATEGEMTGDEIFDSEHSASTMPAATPMPPLEMLVEQTAVIVEPEPRL
TNGGGVITKQVEGLLEHQRPGSELAGFSIVTEQPVRSEPLPIRVECISEPPLPPPPPEML
GGGEVVANEGNVLAPSGAAEQFYSNEGDAANLASDRFLYPDAMSPVPDAAYSVLDAVSPV
PTETGDIGPSLDRASSIGEIPYDAHDANGFVSNNYGENNMNGGSVAVSPTPYESDGYNRN
GYSDMGYNETSSYISNNGNGSMMSGCNDNVSTVNGYNGNENNGSQFVRRRLLPAIPKGRK
PAFNFQCLRPQSSVDNLPVPGIYHGNTSPSRSRLQVQHSLDSRPSSVSSMSSASWANTAA
AGTTPLPKIIAPTGRRGKLIYTPMILVDQASGTSQPLWCDGSASLPTGQRPGWYPGQTRT
FTSVRMPPSGNQSFLDKGSADSLVESILISEGLGVYARDPKFVNFAKREIAEACHMSLDE
MESAAVDLIARGASHSLSRFEDELADEMNCVISY
NT seq
6225 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgcaaagaaagacgccccgcctgtgggcgatgcaggcaagtcagacaccctc
ggatcgactggctcggccagaaaaaggggagggggggccaagaaggcgatgcaggccaac
aagtctgccctcagggcgccccgagccctttgctgcctcactctgagcaaccccatccgc
atggcagccctggccctggtggagtggaagccttttgacatttttattctactcgccatt
tttgccaactgcgtggccatgggcgtcacaaagccgtacccagatgatgattccaacgcg
accaatcacaagcttgaacaagttgagtatgtcttcctcgttatcttcacgattgagacc
ttcaccaagattctggcctacggtttagtcatgcaccccagcgcctacatacgtagtgga
tggaacttgcttgatttcatcatcgtcattgttgggttgttcagtgtgattgcagaggga
atgaccgatcataagccaggagaggcccatcatgctgcggggaaacctggaggtctggat
gtaaaagctctcagagcgttcagggtgctgcgaccacttcgacttgtatctggagtgccg
agtttacagattgtgttgaactccatcatgaaggccatggtccccctcctccacatcggt
atgcttgtgatgttcgtcatcatcatctacgccatcatcggcctggagctgttcatcggc
aggatgcacaagacgtgcttcgacatcggcacaggtctcatggtggaggacgatccatct
ccttgtgctttcgccggcgtcgggcgtctctgtgtggagaatggaacggactgcaggggg
aagtgggagggtcccaacggtgggatcacaaactttgacaacgttttctttgccatgctc
actgtcttccagtgcatcaccatggagggttggacagatgtgctctactggatgaacgac
tccattggctttgacataccatggatttactttgtttctttagtgatttttggctcattt
ttcatcatcaatcttgtattgggtgtgttgagcggagagttctcgaaggaaagagagaag
gccgtggcgcgtggcgagctgcagaaggcgcaggagagcaaacagatggaggaggacatg
atcggctacatggactggctcatagaagccgaggacgtggatgaagaaggaaacaaacga
gcggcaattgcaaagaaaaagatgatgaagaagtttggctggtacaaacacagtgaggat
ggaggagcagagtcggactctgatgatgatatagcatacctggatgacgacagcggcttc
tgtgcttcactcatggcaaagatgatggccaatagcttctgtgaccagctgtgccagatc
aaccatactttaagaaagaactgtcgtgttgcagtaaagaccactaacttttactggttg
gtgctgctgctggtgtttctcaacactgtggcgagcgcctcggagcactacggccagccc
aaatggctcacagaaatgcaagagcgagccaataagatcctgctgctgctctttactttg
gagatgttgatgaagatgtacgcctttggtcttcagatctatttcatggctctgttcaac
cgtttcgactgctttgtggtgtgcggcggcatcctggagacgctgcttgtggaaattgac
gtcatcccacccattggcatctcggtgctgcgctgcatccgactgctccggatattcaag
atgactcgacactgggctgccctctctgatctggtcacctctctgctcaactccatgaaa
gctatctgctcccttctgctcctgctcttcctcttcctcatcatctttgctttgctgggt
atgcagctgttcggagggaaattcaactttgacgaaactcagatgaagaggagcacattt
gactcgttccctcaggctctgctcacatgttttcagattctcactggagaggactggaac
gctgtgatgtacgacggcatcatggcatacggagggccagtcttccccaacatggtggtg
tgcatttactttgtcatcctcttcgtctgtggtaattacatcctgctcaatgtcttcttg
gctatcgctgtagacaacttggcaggaggtggcggaaagaaaaaagtcgaggagaaaaag
gaggaagaagaggagtgggatgaggatgaagagaaagaaaatgaggatgaagggaacgaa
gaggacgactggcaggaaaacgaggagctgagagccatcgagggactggagggagttgct
ccgttgaagccagagttctccgggcccaaagaaaagatcgtgccgatacccgagggaagc
tccttcttcattctcggaaagaaaaactgtttacgagtcgcctgccacaaccttattcac
cacccctacttcaccaacttcatcctcatcttcatcatcctcagtagtatttcactggct
gctgaggatcccatcaaatcccactcattcaggaacattgtgctcggatacgccgattat
gttttcacttcggtttttactgtggagattgtcctaaagatgaccgtgtacggagctttc
ctgcacaccggctctttctgtagaaatgccttcaaccttctcgatctgctggttgtcagt
gtgtcactcacctctttctttcttcattcaagtgcgatctctgtggtgaagattctccga
gttcttcgagtgctcaggcctcttcgagccatcaacagagccaaaggcctgaagaatgtg
gtgcagtgtgtgtttgtggcgatccgcaccatcggcaacatcctgattgtcacaacgctc
cttcagttcatgtttgcctgtattggagtgcagctttttaaagggagattttacagctgc
acagatgaagctaaacacacaccagaagagtgcaagggaacttttgtggtctacaaaaat
ggagacatgaaccatcccatggttaaagagcgagtttgggaaaacagtgattttaacttc
gacaacgtgctgatgggcatgttggctctgttcactgtatccacatttgaaggctggcca
ctgatcctgtaccgggccgtggacgctaacgccataaaccgaggccctatttacaactac
agagtagaaatctccatcttcttcatcatttacatcatcatcattgctttcttcatgatg
aacatatttgtgggttttgtcatcatcactttccgagaacaaggagaggctgagttcaaa
aactgtgaactcaacaagaatcagcgtcagtgtgtgtattatgcactgaaagctcaacca
atcaagatttacatcccaaaaaacccgtcgcagctaaagttctggagaatcatcaactcc
agccagtttgagtacgtcatgtttgtgctgattctgggaaacacgctcactctggccgtg
cagcattacgaacagtccaagatgttcacctccatcatggacatcctcaacatgattttc
actgtggttttcaccatcgagatgatcatcaagctgatggctctgcgggctcatcactat
ttcatcgacccctggaattcatttgatgcactaatcgtcgtggggagcgtgttggacatc
gcagtgtctgaactgagcggaggaggtggccacggagagggtgggaaaggagaacatggg
aaagtgtccatcaccttcttccgtttattccgagtgttgaggttggtcaaacttctcagc
aaaggcgaaggcattcgaactcttctctggacctttgttaagtccctgcaggctttacct
tatgttggcctcctcatcgccatgattttctttatctatgctgtgattggcatgcagatg
tttgggaaaatagccatcgatgacaacacagaaatcaacagaaactgcaacttccagact
ttcttcatggctgttctggtcctttttaggtgtgccaccggagagcagtggcaggagatc
atgttggccgccctgcccggcagacgctgtgaccccgaatctgaaatcgagccgggtgaa
gagttcacatgtggaagcaatttggcctacatttacttcatcagcttctttatgctctgc
gcttacctgattatcaacctgttcattgctgtcatcatggacaactttgaatatcttaca
agagactggaccgtgctcggtacccaccacctggacgagtttaagagagtttggtctgac
tacgatccagaagccaccgggcgcatcaagcacatcgacgtagtcaccatgttgcgcagg
attcagccgcctcttggctttggaaagctgtgccctcatcgggttgcctgcagaaggctg
gtggccatgaacgtccccctgcaccctgacgggacagtcaccttcaacgccactctgttt
gctcttgttcgaacctcgctcaagattaagactgaaggccctgttgatcagcagaacgaa
gagctgaagattataattaagaagctctggaagcacacgaagcctaaactcattgatgag
attattccgcctcccagaggggatgaggtgacgtgtgggaagttttacgccagcttcttg
atccaagattactttaaaaagttccgcaagagaaaagaaagagagagaaaatccaagagg
aaggacagagcggccgccctgcagctcgggctgcggactctgcaggacctggcaccagag
atgcgtctggcaatggcctgtgacctggaggaggaggaggccacggagggagagatgacg
ggtgatgagatatttgacagcgagcattcagcgagcaccatgcccgccgccacaccgatg
ccccctctggagatgctggtggagcagacggctgtgatcgttgaacctgagcccaggctc
accaacggagggggggtgatcaccaagcaggtggagggcttgctggagcaccagagacca
ggatcagagctggcaggtttcagcattgttacagagcagcctgtgaggtctgagcccctg
cccatcagggtggagtgcatcagtgaaccacctcttcctcctcctcccccagagatgtta
ggtggaggagaagttgttgccaatgaagggaacgttttggctccaagtggagcagctgag
cagttctacagcaatgagggagatgctgcaaatctagcatcagacaggtttttatatcca
gatgcgatgtctcctgtaccggatgctgcgtattcggtacttgatgctgtgtctcctgta
ccaactgagacaggagacattggcccgagtctggacagagccagcagcataggagaaata
ccctatgatgctcatgatgctaacggctttgttagcaacaattacggtgaaaacaacatg
aacggagggagtgtcgctgttagtcccactccctacgagtccgacggatataacaggaat
ggctacagtgacatgggctacaatgaaaccagcagctacatcagcaataatggtaatgga
agtatgatgagtggctgcaatgacaatgtcagcaccgtcaatgggtacaatgggaacgag
aacaacggttcccaatttgtccggagacgactacttcctgccatacccaaaggtcgtaaa
cctgcctttaacttccagtgtctgaggccgcagagcagcgtggacaacctccctgtccct
ggaatttatcacgggaacacgtctccgtccagatcccgtctgcaggtccagcacagcctg
gactcgcggcccagcagcgtgtcctccatgtcgtccgcctcctgggccaacacggcggca
gctggcaccactcctctccccaaaataattgcccccacaggccgcaggggcaagctcatc
tacacccctatgatcctggtggatcaagcgtccggcaccagtcagcctctgtggtgcgac
ggctctgccagccttccaacgggacagcgtccaggctggtaccccggtcagaccagaacc
ttcaccagcgtgaggatgccgccctctggcaaccagagctttctggacaaaggcagcgcc
gacagtctggtcgagtcgatcctgatctccgaggggctcggcgtctacgcccgggacccg
aagtttgtgaactttgccaagcgggagattgctgaagcgtgccacatgagcctggacgag
atggagagcgccgccgtggacctgatcgcacgcggagccagtcactcactctcccgcttc
gaggacgagctggccgacgagatgaactgtgtgatttcttactga
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