Kryptolebias marmoratus (mangrove rivulus): 108232090
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Entry
108232090 CDS
T05608
Symbol
plxnd1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108232090 (plxnd1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
DUF1561
Motif
Other DBs
NCBI-GeneID:
108232090
NCBI-ProteinID:
XP_017265153
UniProt:
A0A3Q3AU18
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All DBs
Position
LG8:complement(12973549..13060509)
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AA seq
1906 aa
AA seq
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MPPSCMEIAVLLLGVLALETRRSASALHIQQAFASPNHTNNFAVDPVSGNVYLATVNTIY
QLNGTLSVEVEKRTGPVEDNLLCHAPQLPQAPCEHPKSLTDNYNKLLKLDRDQGVVVVCG
SVYQGFCELRRMGNISEIAVEFPPQGEKTVFPSMLNIAANHPNASTVGLIFKSHGGSTRL
LVGATYTGAGTQFFPKNHSKEDLRFENTPEIAIRSLNLKDLSRLFTYDINPSEDNVFKIK
QEVKAKNKLNFVHAFTQKTYSYIAFNNDAKMGHKESQPNSILSRICLDTETPRKPTGPES
KKLTESYIQMPLQCGQSGNIYNRLLSVYPAEIRAAGDGRGPEPYLFGVFSKVDRKSALCA
FRFRDVEEEIRQGRKNCSNSPSSDVQVLDSVIQGSGAACVQKGNLVLQPEQLDCGAAHLQ
HPLALRRPLRAVPLFEYPSLTSVSVDSVHDHTVVFLGTSNGRLRKLTLLANMTLANQRTL
KLPASEAVHHIMTFDPNDSNFLYVMTSHHMLRVKVAQCDQWKSCRDCLGAGDAHCGWCTL
ENRCTIQKECARELLARSWIPVGEGPQQCPSITLTPPEISISADIKDVGILINGSVPNLI
GSRVECEYRPGVSTAATLHLDYGPAQIQTCPLLPREHFQPIPPGTDHLTLSVAIKVNGTS
VVSGSFIIYDCERTGAIHPKTSCVSCLSTKWKCYWDQEKHLCLANKEHSKDPIESATLCP
SLIASEVPPSPSGEAQDFTLSLSNIREREKLDCDFGTEQRYEAIWLDDSTVNCTGVTLST
SQRSQVYHLNLRRRGYFISQRGDIFLDSPQPMKVEVYNCGVGSSDCSQCWGREDQRHLCG
WCENSCRLKKDCQSIGDQCPAPEIHKISPLRGPAEGGTLLTVQGRNLGRRPAGVQISIGN
IPCDLLPERYTVSVKLVCRTGRSARDRMEFVQVDVDQDGGTPKTGTSKEKFSYLVPKLKS
IEPERGSRIGGTRVTLSGEHLDIGSKVRVKVNSTLECNITEKTDETIECIMPPALQAHAD
LVTVCVEFEGHPCEGSESELDIPYTYEKNPTIDSIHPKKSFLSGGRTITVTGQGFDLVQS
VVMEVQGIGSTPCGIVSSSTITCLSPAASQSQGTSVQFILNNIIYTRDSPSSSDNEPEEE
NGEPHKSSFLLDYVEDPQFYTANKEKLIKHHSGEPLTLIINKVPSDLELLPEEYSVMIGP
YPCNISFHNDQLFHCTINGLLSSSESEMPVTVQVGNFHKSIARVQLGGSELAIVVSIVVC
CVLLLLCTVALVVYCTKSRRAERYWQKTIVQMEEMESQIREEIRKGFAELQTDMTDLTKE
LNRSQGIPFLEYKQFVTRTFFPKMCSDYETSLVQPTYENDSLGPRALPETHPLLQDWQAT
NTTRPNVEEGITMFSTLLNNKHFLVTFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYY
TSIMKDLLVDLIDASASKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLC
AIKQQINKGSIDAITGKARYTLNEEWLLRENIEAKPQNINVSFQGCGMDSLSVRVMNTDT
ICQVKEKILEAFYKNLPFSQWPRAEDVELEWFDSGSNSKLLQDLDNSSVMEDSRKKLNTI
FHYQVPEGASLAMSMKDKKENTLERVKDLDTEKYVHLVLPHDELIETKKSHRHSHRKKVL
PEIYLTRLLSTKGTLQKFLDDLFQAILSIPPDRPPLAVKYFFDFLEEQADKRGITDPDTL
HIWKTNSLPLRFWVNILKNPQFVFDIDKTDHMDACLSVIAQAFIDACSISDLQLGKDSPT
NKLLYAKEIPEYKKRVQCYYKQIQEMAPLSEQEMNAHLAEESRKYRNEFNTNLALTEIYK
YAKRYRNQVVNALEANPTARRTQLHHKFDQVVALMEDNIYECCSEA
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttcttgcatggagatagccgtcctgctcctcggcgtcctggctttggagacg
cgccggagcgccagcgcactgcacatccaacaggcgttcgcgtctccaaaccacaccaat
aacttcgcggtggacccggtctccgggaacgtctacctggccaccgtcaacacgatctac
cagctcaacgggaccttgagcgtggaggtggagaagagaacggggccggtggaggacaac
ctgttgtgccatgcgccacagctgcctcaggctccgtgcgagcatcccaaatccctcacg
gacaactacaacaagctgctgaagctcgaccgggaccagggggtcgtggtggtgtgcggg
tccgtctaccagggcttctgcgagctgaggaggatgggcaacatctcggagatcgcggtg
gagttcccgccgcagggcgagaagacggtcttccccagcatgctcaacatcgccgccaac
cacccgaacgcgtccacggtggggctcatcttcaagagccacggggggagcacccggctg
ctggtgggggccacatacacgggggccgggacccagttcttccccaagaaccacagcaag
gaggacctgcgctttgaaaacaccccggagatcgccatccgctccctgaacctcaaggac
ctgtccagactgttcacctacgacatcaacccctcggaggataacgtgttcaagatcaaa
caggaggtcaaagccaaaaacaagctgaacttcgtgcacgccttcacccagaagacttac
tcctacattgcctttaacaatgacgccaaaatgggccacaaggagagccagcccaacagc
atcctctccaggatctgtctggacaccgagaccccccggaaacccacggggccggagagc
aagaagctcaccgagtcctacatccagatgccgctgcagtgcgggcagagcgggaacatc
tacaaccggctgctgtccgtctaccccgccgagatccgcgcggcgggggacgggaggggc
ccggagccctacctgttcggagtgttctccaaggtggacaggaagtccgccctgtgcgcc
ttcaggttccgagacgtcgaggaggagatccggcagggccgcaagaactgctccaactcc
cccagcagcgacgtgcaggtgctggacagcgtcatccaggggtccggggccgcgtgcgtt
cagaaggggaacctggtgttgcagcccgagcagctggactgtggcgcggcccacctgcag
caccctctggccctgcggagacccctcagggccgttcccctgtttgaatacccaagcctc
acctctgtctcggtggacagcgtgcacgaccacaccgtggttttcctgggcaccagcaat
ggacgacttcgtaagctgaccctgctggcgaacatgaccctggccaatcagaggacgctg
aagctgccagccagcgaagcagtccaccacatcatgacctttgaccccaacgacagcaac
tttctgtatgtcatgacctctcaccatatgctgagagtgaaagtggcacagtgtgaccag
tggaagagctgcagagactgtctgggagcaggagatgcccactgtggctggtgcacttta
gagaacaggtgtaccatccagaaggagtgtgctcgagagctgctggctcgctcctggatc
cctgtgggtgaaggcccccagcagtgtccttctattaccctgacacccccggagatcagc
atctctgccgacatcaaggatgtcggcatcctgataaatggcagcgtccccaatctgatt
ggctcacgggtggagtgtgagtacaggcccggcgtttccaccgctgccacgttacacctg
gactatggtcccgctcagatccaaacgtgccccttactccctcgagaacacttccaaccc
attcctcctggcacagatcacctgactctttctgtggcgataaaagttaatggcacatcg
gtggtatctgggagcttcatcatctacgactgcgagaggaccggagcaatacacccaaag
acatcatgcgtgagctgcctgagcacaaagtggaagtgttactgggaccaagagaaacac
ctatgtcttgccaataaagaacactcaaaggacccgatagaaagtgcaactttgtgtccc
agcctgattgcctcagaggttcctccgtcaccgtcaggagaggcccaggacttcacccta
tccttgagcaacatccgggagagggagaagctggactgtgacttcgggacagagcagcga
tatgaggccatatggctggacgactcaactgtcaattgcaccggggtgacgctgtccact
agtcagaggagtcaggtttaccacctcaacctcaggaggagaggatactttatcagtcag
aggggggatatatttcttgacagccctcagcccatgaaagtggaggtgtacaactgtgga
gtgggcagttcggactgctcccagtgctggggccgcgaggatcagagacacctctgtggc
tggtgtgaaaacagctgccggctgaagaaggactgtcagtcaatcggggatcagtgtcct
gctcctgagatccacaagatctcccccctgaggggtccggctgaaggagggaccctgctc
acagtacaaggcaggaacctgggccgaagacctgcaggagtccagatctctataggcaac
attccttgtgacctgctgcctgagcgctacactgtctccgtaaagctcgtgtgtcgcacc
gggaggtctgcacgcgacaggatggagtttgtccaagtggacgtggatcaggacgggggg
acgccaaagacgggcacgtcaaaggagaagttttcatatttagtcccaaagctgaagtca
atagagccggagagaggctctcgtatcggaggaaccagagtcaccctcagcggggaacat
ttggatattggctctaaagttagagtcaaggtcaacagcacactggaatgcaacatcaca
gagaaaacagatgaaacgattgaatgcatcatgcctccagccctgcaggcgcacgctgac
ttagtgacggtgtgtgtggagtttgagggccatccttgtgagggttcggagtcagagctc
gacatcccatacacctacgagaagaaccccactatcgactccatccatccgaaaaagagc
ttcctcagtggtggcaggaccatcactgtaaccggtcaggggtttgatctggtgcagagc
gtcgtcatggaagtgcagggaattgggtcaacgccctgtggcattgtctcctcctccacc
atcacctgtttgtccccggcggccagtcagtcccagggaacctcggtgcagttcatcctg
aataacattatctacaccagggacagcccttcctcctctgataacgagccagaggaagaa
aacggggaacctcacaagagtagcttcctgttggactatgtggaggaccctcagttctac
accgccaacaaagagaagctgattaaacaccattcaggggagccactgactctcatcatt
aacaaagtgccgagtgacctggagctgctgccggaggagtactcggtgatgatcggcccc
tatccctgcaacatcagcttccataacgaccagctgttccactgcaccatcaacggactg
ctgagctccagcgaaagtgagatgcccgtcactgtgcaagtggggaactttcataaaagt
atagccagagtgcagctcggcggcagcgagctggccatcgtggtctccattgtggtgtgc
tgcgtgcttctgctgctgtgcacagtagctctggtcgtgtactgcacaaaaagccggagg
gcagaacgctactggcaaaaaacgattgtacaaatggaggagatggagtcccagatcaga
gaggagatccggaaaggctttgcagagctgcaaacagacatgacagatctgaccaaggag
ctgaatcgcagccagggcatcccctttttggagtacaaacagtttgtcacgcgcacgttc
ttccccaagatgtgttcggattacgagacgagccttgtccagcccacctatgagaacgac
tccctgggaccgcgagcgcttccagagacccaccctctgctgcaggactggcaggccacc
aacacaacacggcctaacgtggaagagggcatcaccatgttctccactctgctcaacaac
aagcacttcctcgtcacgtttgtccacgccttggagcagcagaaggactttgctgtcaga
gacagatgcagcctggcgtccctgctcaccattgccctccatggtaagcttgagtactac
acgagcatcatgaaagacctgctggtggatctgattgacgcttcggcctccaagaacccc
aaactgatgctgcgccgcaccgaatcggttgtggagaagatgctgaccaactggatgtcc
atctgcatgtacagctacctgaaggaaaccgtgggtgagccttttttcctgctgctttgt
gcaatcaagcagcagatcaacaagggctccatagacgccatcacagggaaggcccgctac
accctcaacgaggagtggctgctgcgggagaacattgaggccaagccacagaacatcaac
gtgtccttccagggctgtggcatggactcgctgtcagtccgagtcatgaatactgacacc
atctgccaagttaaagaaaaaatccttgaagccttttataaaaacctgcctttctcccag
tggcctcgagcagaggatgtggagctggagtggtttgactcgggcagcaacagtaagctt
ctgcaggacctggacaactcctcggtgatggaggacagtcggaagaaactcaacacgatc
ttccattaccaggtcccagagggagcatcgctggccatgagcatgaaagacaaaaaagaa
aacaccctggagagagtcaaagatctggatacagagaaatatgtacacttggttctacct
cacgatgagctaatagagaccaagaagtcccacagacacagccaccgcaagaaggttctg
ccagagatctatctgacacgcctgctgtccaccaagggaacccttcagaagttcttagat
gacctttttcaggccatcctcagcattcctccggaccgcccacctctagctgtcaaatac
ttttttgacttcctggaggagcaggctgacaaacggggcatcacggacccagacaccctg
cacatctggaaaactaatagtttacctctgcgtttctgggtgaacatcctgaagaaccct
cagtttgtgtttgacatcgacaagacggatcacatggacgcctgtctgtccgtcatcgct
caggctttcatcgatgcctgctccatttccgacctgcagctgggcaaggactctccgact
aacaagctgctgtatgccaaggaaatcccagagtacaagaagagagtccagtgctactac
aagcagatccaggaaatggcccctctcagtgagcaggagatgaacgctcacttggctgag
gagtcgagaaagtacagaaacgagtttaacaccaacctggccttgacggaaatctacaaa
tatgccaagagatacagaaaccaggtggtgaacgctctggaggctaaccccactgcacgc
cgcactcagctgcaccacaagttcgatcaggtcgtggctctcatggaggacaacatctac
gagtgctgcagtgaagcctga
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