Kryptolebias marmoratus (mangrove rivulus): 108233940
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Entry
108233940 CDS
T05608
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein homolog
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108233940
Membrane trafficking [BR:
kmr04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
108233940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
108233940
NCBI-ProteinID:
XP_017268215
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All DBs
Position
LG22:21423266..21428857
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AA seq
930 aa
AA seq
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MSRFELEELSRFGDYTGSQELTDMLVSSEDEHKNRLSDVRVSPDGRHIHIILPEPKVGLV
TFDKYERPQPPQNHKTLELCSSPRTVPVVDVCYLDHNNNSRGTAIAAVIYENGKAEFWCF
QESKGGWRLLQASDLCNSPRARVVSVCVCSSFIIWCEERPPSESSTRNKLRYCVCRRDFE
VEEGAVILAGVKIILHDNPKFTVISSGDYVHLLPDPSVKPLPCIFKFFLTWSPHHDSFTV
GAACKNTPIKKLSAKELDFKKLIVDCLGYLSALEPPEICSFSPTGHGGLLLLLSTGWLCL
LQKDGTMRQVYKLPENSLVKHGTHTSLCMYINVLALIIGRNLHLIELSCGRELQKIVLKG
AGLLYANQTERQTPHLLSETGLFVVADRKAESADCSFKAKPPGFGPAEGAHSGALLIEAV
FEEACKYYQQRSLSSTQLTVDALKKGGRFQAPISLASILRGFLGTGFRKKGAEPVENAGG
EFNVGRDKLMASLEGELKALVSLEELKGSLVRGGAEEVEAVCETLVEKEVVRLLSSSELD
KEALMYLNSIFSIFPCQAWRAAQAALQLHYNGEGSLSSRAPPDVWKTVLSPTLTSSPTAS
HLFPNGQPKHNHSLKGDLSYRGKASPLSSSVALPVFELLCESVLHFQPTWLPSFLELAQQ
QQGSAGLGLSLASSSWSFSGGRGGEGGENNVPLYKRALCLLSSMKRDSDQHWDLEVELLL
VGGRPNAILQALRILMSERRWERVTQVAQRFCKQSPLLNKEIFTTLLCEVVQHRDLDPYL
DLLWMLCPEDFTVTTILNLVLKNLPSPNTSSHPLTFSMSHTNSSSSPPPFADPQSSSQLT
IGLLKPLLRKVLQRETKPSQHYVDILQSPSYPPPALPRQPTEQPSSVTDSAPCSSATTAL
CAETPEQQPSTHTTAQRSSAALPAAPLGFT
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggttcgagctggaggagctgtcgcgtttcggggactacacgggcagccaggag
ctgacggacatgttagtttcgtccgaggacgagcacaaaaacaggctgtcagatgttcgc
gtgagcccagacggacgtcacatccatatcatcctccccgagcctaaggtcggtcttgtg
acttttgacaagtacgagagaccccagccgcctcagaaccacaagacgctggagttgtgc
agctctccgcgaacggttcccgtcgtggatgtttgctacttggatcataacaacaacagc
agaggcactgcgattgctgcggtgatttatgagaatggaaaagcggagttttggtgcttt
caggagagcaagggtggctggcgtctcctgcaggcgtcagatctgtgcaacagtccccgc
gccagggttgtgtccgtctgcgtttgctccagctttatcatctggtgcgaggagcgcccc
ccctcagagagctccaccaggaacaagttaaggtactgtgtttgcagacgagactttgag
gtcgaggaaggggctgtcatcttggccggcgtgaaaatcatcctccacgacaaccccaag
ttcacggtgatcagctcgggtgactatgtgcacctccttcccgacccgagcgtgaagccg
ctgccgtgcatcttcaagtttttcctcacctggtcccctcaccacgactccttcactgtc
ggcgccgcgtgcaaaaacacccccatcaaaaagctgtcggccaaggagcttgactttaag
aagctgatcgtggactgtttagggtatttatcggctctggagccgcctgagatctgcagc
ttttcgcccacgggccacggaggcctgcttcttctcctcagcactggctggctgtgtctc
ctgcagaaggacgggacaatgagacaagtatacaagctgccggagaactccttggtaaaa
cacggcacacacaccagcctgtgtatgtacataaatgttctggcgctaataatagggcga
aacctgcacctaatagagttgagttgtggcagagaactgcaaaagattgttttgaaggga
gcagggttgttgtacgcaaaccaaactgaaaggcaaactccccatctgctctcagaaact
ggactttttgtggtagcagacagaaaagcagagtccgcagactgcagctttaaggcgaag
cctcctggttttggtccggctgagggcgctcattccggagccctcctgatagaagctgtc
tttgaggaggcttgtaaatactaccagcagaggagcctgagcagcacccagctcaccgtg
gacgcgctgaagaaaggcggacgcttccaggctcccatctctttagcctccatcctcagg
ggcttcctcggcacaggcttcaggaagaagggtgcggagccggtggagaacgcgggaggg
gaattcaatgtggggcgagacaagcttatggcctctctggagggcgagctcaaggccctg
gtgtccctggaggagctgaaggggagtttggtgaggggaggcgccgaggaggtggaggcg
gtgtgcgagaccctggtggagaaagaagtggtgaggctgctgtcatcttctgagctggac
aaggaggctctgatgtacctgaactccatcttcagcatcttcccctgccaggcgtggagg
gctgcacaggctgcgctgcagctgcactacaacggggaggggtctctgtccagccgggcc
cccccagacgtgtggaaaactgtcctcagccctactctgacgtctagccctacagcctcc
catttatttccaaacgggcagcccaaacacaaccacagccttaaaggggatctcagttat
agaggcaaagcctcacccctctcctcctcagttgccctgccggtgtttgagctcctctgt
gagtcagtccttcacttccagcccacatggctgcccagcttcctggagctcgcccagcag
cagcagggctctgcaggtttgggcctgagccttgcttcgtcctcctggagtttttccggc
gggagaggaggggagggcggcgagaacaacgtgcccctctacaagcgagcgctgtgcctc
ctgtccagcatgaagcgggacagcgaccagcactgggacttggaggtggagctcctgctg
gtcggcgggcggcccaacgccatcctgcaggctctgaggatcctcatgagcgagcggcgg
tgggagcgggtcacccaggtggcccagcggttttgcaaacagagcccacttctcaacaag
gagatcttcaccacgctgctctgcgaggtggttcagcacagagacctggacccctacctg
gacctcctgtggatgctgtgccctgaagacttcactgtcaccaccatccttaacttagtg
ctgaaaaaccttccatctccgaacacttcctcccaccccctgactttctccatgtcccac
acaaactcctcctcctccccccctccctttgcagaccctcagagcagcagccagttgacc
ataggcctgttgaagcccctgctgagaaaggtccttcagagggagacgaaaccaagtcag
cattacgttgacatcctacagtccccgtcatacccccctccagctctgcctcgccagccc
acggagcagccgagctctgtcacggactcggctccgtgcagcagcgccaccacagctctc
tgcgcggaaacgcccgagcagcaaccgtccacgcacacaaccgctcagaggtccagcgcc
gcacttcctgccgccccactcggatttacctaa
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