Kryptolebias marmoratus (mangrove rivulus): 108234799
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Entry
108234799 CDS
T05608
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha isoform X1
KO
K08536
liver X receptor alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03320
PPAR signaling pathway
kmr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108234799 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
108234799 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108234799 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
kmr03310
]
108234799 (nr1h3)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108234799 (nr1h3)
Nuclear receptors [BR:
kmr03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
108234799 (nr1h3)
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Ortholog
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
DUF6279
Late_protein_L2
Motif
Other DBs
NCBI-GeneID:
108234799
NCBI-ProteinID:
XP_017269763
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All DBs
Position
LG15:25022345..25033151
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AA seq
468 aa
AA seq
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MSTLSVTDIPDVGHGEKKNESKVFNGASELQLDCTVQESSGSAAMKPDSLLSLTDLSQPD
DFPVPLQNEPPLTEMGSPLPVEPGDIKLDPSAADASSSIDGQPVKRKKGPAPKMMGNEVC
SVCGDKASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKC
REAGMLEQCVLSEEQIRLKKLKKQQEEETARTSAVVTPTPLQETAALDPQQQEMIEKLVA
MQKQCNKRSFLDRPKVTPWPQSQDPQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFL
ELTREDQIALLKTSTIEIMLLETSRRYNPAIDSITFLKDFSYNKEDFAKAGLQFEFINPI
FEFSKGMNDLHLDEAEYALLIAINIFSADRPNVQDHDLVERLQQPYVDALRSYIMIKRPN
DHLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVNE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgttgtctgtgactgatatcccagatgttggtcatggtgagaagaaaaatgag
agtaaggtgttcaacggggcctctgagctgcagctggactgcacggttcaggagagcagt
ggaagcgccgcaatgaagcccgatagcctgctgtcactgaccgacctctcccagccggat
gacttccctgtccccctgcagaacgagcctccgctgacggagatgggcagccctctgccc
gtggagccaggcgacattaagctggatccatcagcggctgacgcatccagcagcatagat
gggcagccagtgaagaggaaaaaggggcctgccccaaagatgatgggcaacgaggtgtgc
agtgtgtgcggcgacaaggcctcgggtttccactacaacgtgttgagctgcgaaggctgc
aagggcttctttcggcgcagcgtcattaaaagcgcccagtactcctgcaagaacaatggc
cgctgtgaaatggacatgtacatgcgccgcaagtgccagcagtgccgcctgcgcaagtgt
cgggaggcaggcatgctggagcagtgtgtgctttccgaggagcaaatccgactgaaaaag
ctgaaaaagcagcaggaagaggaaacggcgcgcacgtccgcagtggtcacgcccaccccc
ctgcaggaaacggcggcgctcgacccacagcagcaggagatgatcgagaagctggtggcc
atgcagaagcagtgcaacaagaggtctttcctcgatcgaccgaaagtgacgccgtggccg
cagagtcaggatcctcagaatcgagaggtgcgccagcagcgcttcgcccacttcactgag
ctcgcaatcatgtcggtccaggagattgtggacttcgccaagcagctacccggtttccta
gaactgacacgagaagaccagatcgctctgctgaaaacgtccaccattgagatcatgttg
ctcgagacctcgcggagatacaaccctgccattgacagcattacgtttctgaaggatttt
agctataacaaggaggattttgccaaagcaggccttcagttcgagttcattaaccccatc
tttgagttttcaaaaggaatgaacgacctgcacctcgacgaggccgagtacgccctgctc
attgctatcaacatcttttctgcagatcggccaaatgtgcaggatcacgatctggtcgag
aggctgcagcaaccttacgtggatgcgctgcgctcttacatcatgataaagagaccaaat
gatcatttgatgtttccccgcatgctgatgaagctggtgagcctccgcacgttgagtagt
gtccactcggagcaggtttttgcccttcgtctccaggacaagaagcttccgccgctgctg
tctgaaatctgggatgtcaatgagtga
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