KEGG   Kryptolebias marmoratus (mangrove rivulus): 108234801
Entry
108234801         CDS       T05608                                 
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04010  MAPK signaling pathway
kmr04120  Ubiquitin mediated proteolysis
kmr04140  Autophagy - animal
kmr04144  Endocytosis
kmr04620  Toll-like receptor signaling pathway
kmr04621  NOD-like receptor signaling pathway
kmr04622  RIG-I-like receptor signaling pathway
kmr05132  Salmonella infection
kmr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108234801 (traf6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108234801 (traf6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108234801 (traf6)
   04140 Autophagy - animal
    108234801 (traf6)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    108234801 (traf6)
   04621 NOD-like receptor signaling pathway
    108234801 (traf6)
   04622 RIG-I-like receptor signaling pathway
    108234801 (traf6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    108234801 (traf6)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108234801 (traf6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:kmr04131]
    108234801 (traf6)
   04121 Ubiquitin system [BR:kmr04121]
    108234801 (traf6)
Enzymes [BR:kmr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108234801 (traf6)
Membrane trafficking [BR:kmr04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    108234801 (traf6)
Ubiquitin system [BR:kmr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    108234801 (traf6)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 TRAF6_Z2 zf-C3HC4_4 zf-RING_5 TRAF3_RING RING_XB3-XBAT31 zf-TRAF_2 CEP104_ZnF Sina_ZnF zf-rbx1 U-box zf-RING_11
Other DBs
NCBI-GeneID: 108234801
NCBI-ProteinID: XP_017269767
UniProt: A0A3Q3A0A8
LinkDB
Position
LG15:complement(25765603..25774036)
AA seq 573 aa
MACFESTSTKGSLEEDSYDGAVGGELSGCALAMMAKERESLLSPSESPGTFMSTSSSSLQ
TAAPIQGYDVEFDPPLESKYECPICLMALRNAIQTRCGHRFCKSCIEKSIRDTGQRCPVD
NEMLSEDQLFPDNFAKREILSLTVRCPNSGCGEKMELRQLENHLAQCQFATMPCPQCQQA
VRKSYLEEHKTVECQRRLVSCPDCVTSFFYEEKELHEQQCPFANVKCQYCEMELIRDQME
SHCDADCPKAPIACNFSMFGCKEKMQRHDLAQHMQEFTQMHMRYMAEFLRGFCLNGATPK
PLRTLGPSISNEDQGAAASVPACGGPRGAASCSINTTTCQPSQEMQRLREMDGRLVKQDH
QLRELIILKETQAGQLADLKRRMSALEDTIKELESQQCHGIFIWPLRGFSALLRNQETGT
PVVEHSPGFYTGRPGYKLCMRLHLQSPNAPRCSNYISLFVHTMQGAFDGQLTWPFQGNIR
LAILDQGPEAQHHVEVMETKPDLQAFQKPTIHRNPKGFGYVTFMHLQQLNQKMYIKDDTL
LIRCEVTPRFDTVVHREGPTVQPRGPEASVSRD
NT seq 1722 nt   +upstreamnt  +downstreamnt
atggcttgctttgagagcaccagcaccaaagggagtttggaggaggacagctatgatgga
gcagtcggtggagagctgtctggttgtgccttggcaatgatggcaaaggaacgagagtct
cttctaagcccttccgaaagtcctggcaccttcatgagtacctcctccagcagccttcaa
actgccgcccccattcagggctatgatgtagagtttgacccacccctggagagtaaatat
gagtgtcctatctgcctcatggctttaaggaatgctatacaaacacgctgtggtcaccgc
ttctgcaaaagctgcattgaaaagtctattcgcgatacaggacagcggtgccctgtggac
aatgaaatgctgtcagaggaccaactgtttcctgataactttgccaaaagggagatttta
tcgctaactgttcgctgtccaaactccggctgtggtgagaaaatggagctccgacaatta
gagaatcatctggcacagtgtcagttcgccaccatgccttgcccacagtgccagcaggct
gtgagaaaaagctacctggaggagcacaaaaccgtcgagtgccaaagaagacttgtctcg
tgtccagactgcgtgacaagctttttttatgaggaaaaagagcttcatgagcagcagtgt
ccttttgccaatgtgaagtgtcagtactgtgagatggaactcatcagagaccaaatggaa
tctcattgcgatgcagattgccccaaagcccccatcgcctgtaattttagcatgtttgga
tgtaaggaaaagatgcagcgccatgacctggcccagcacatgcaggagttcacgcagatg
cacatgcgctacatggctgagtttttgcgcggcttttgcctcaatggcgccacgcccaag
cctctgcggacgctagggccttccatttccaacgaggaccagggagctgcggcgtcagtg
ccggcctgtggtgggccccgaggagctgcgagctgcagcatcaacacgacaacatgtcag
cccagtcaggagatgcagcggctcagggagatggatggacgactggtgaagcaggatcac
cagctgcgggagctcattatcttaaaagagacgcaagcaggccagcttgcagatctcaag
cgtaggatgtctgcgctggaggacacaataaaggaactggagtcccagcagtgtcacggt
atcttcatctggcccctccgaggtttctctgccctcctgcgcaaccaagaaacggggacg
ccggtggttgagcacagccccggcttctacacaggtcgtccaggctacaagctgtgcatg
cgtctacacctgcagagccccaacgccccgcgctgttccaactacatctcgctcttcgtc
cacaccatgcaaggggctttcgacgggcagctaacctggccgtttcaagggaacatccgg
ctcgccatactcgaccagggacctgaggctcagcatcatgtggaggtcatggagacgaag
ccggacctgcaagccttccagaagcccaccattcaccgcaaccccaaaggatttggctat
gtcacctttatgcacctgcagcagctgaatcagaaaatgtacattaaagatgacactctg
ctgatccgctgtgaggttacaccacgctttgacactgtggttcatcgtgagggaccaaca
gtacagccaagaggacctgaagcatcggtgtcaagggactaa

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