Kryptolebias marmoratus (mangrove rivulus): 108235285
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Entry
108235285 CDS
T05608
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
kmr04812
]
108235285
Cytoskeleton proteins [BR:
kmr04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
108235285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
Atx10homo_assoc
ARM_ARMC5
INTS1_R4
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-GeneID:
108235285
NCBI-ProteinID:
XP_017270694
UniProt:
A0A3Q3BNP1
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All DBs
Position
LG8:16388988..16404390
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AA seq
714 aa
AA seq
DB search
MMAPDPLRSASTVGGTEDTSLALPSDRTLSSGKQRVLDQVHSIKRTKSRHSKSVSSPTSP
SPKTLTTYNEFGTFKFMSTKGNGLVGRSSSSSTMSAAGYSKATSFQKTRSQSARVPSRRN
DSFMAALEPQTSVVLPKKPNGLQTSRSDSALNPPLSPAEAHTRSIKGRNTIKMKQSTTSA
VNGTLLTNSQTGFPMPTSNQSQTDGWMGTSKATKLEQGSMVNSVHSNREVNLKDAVEMLS
HSDENYQQFGASVIQNATFKDEAAKNEVYELNGIPPLVELLEHENVKVNEVAAAALRNLV
FKNPRNKVQVDHCGAVAKALKLLKSRSSSSEAKKQATGLLWNLSSDEELKQDLLDTALPG
LTDIVVQPYVMDDKDIDIDEQSFCNALGCLRNLSSGGVIARRCMRNCPRLIDSLVMYTES
CVRKETPDEMGVENCVCILQNLTFQLAKEKPDAFDHNNSRAVQTEEKNAPVGCFSPRSSK
IQNEYPFLKHPADSADTDPSGVKWLCHPRTIDTYLSLLESSPNKITQEACCGALQNLTAN
SKVNGDVDQILMEKLKTSLPLKALMKSDNKTIRKTAFALLDNMSRSKVKLSMAQQMLPEL
VDFLLAHTEDHTKLFSDEEAEKLSKILLRLLLSDTEVTKKVLNKAMISKLITLSNQRQET
YPKGSTATSVLLFNIWNDKNLHTVAKKTGFSKSLFVNKVSISANEILKSTASNE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaccggacccgctgagatcggcatcgaccgtcgggggcacggaggacacctcg
ctcgcgctgccgtccgacaggaccctgagctcggggaagcagcgcgtgctggatcaggtt
cacagcattaagaggaccaagtcccgacacagcaagagcgtctcgtctcctacaagccca
tcgccaaaaactttaacaacctataatgagtttgggacgttcaaatttatgtcaactaaa
gggaacggcctcgtcggtcgctccagctccagctccaccatgtcagcagcgggctacagc
aaagcgacaagttttcagaagactcggagtcagtctgcaagagttcccagtagaagaaat
gacagcttcatggctgccttggaacctcaaaccagcgtcgtcttgccaaagaaacccaat
gggctacaaaccagtcgcagtgactctgctttgaaccctcctctttctcctgctgaagca
cataccaggagcatcaaggggcggaataccattaaaatgaaacagagcaccacttccgct
gttaatgggacattactcaccaacagccaaacaggtttccccatgccgacctctaaccaa
tctcaaactgatggctggatgggtacatccaaagccaccaaattagagcaggggtcaatg
gtgaactctgtacatagcaacagagaggtgaacttgaaagacgctgtggagatgctgtct
cacagtgacgagaattaccagcaatttggagccagtgtcatccaaaacgccaccttcaaa
gatgaggcggccaaaaatgaggtatacgagctcaatggtattccacctctggtggagctg
ttggagcatgaaaatgtaaaggtgaacgaggttgctgctgcggctttaaggaatcttgtt
tttaagaacccaagaaacaaggtgcaagttgatcactgtggtgctgtagccaaggccttg
aaactactaaagtcaaggtcgtcatcctctgaagccaagaaacaagccactggccttctg
tggaacttgtcttctgatgaggagctgaagcaagatctgttggacacagctttgcctggc
ctgactgatattgtggtacaaccatacgtaatggacgacaaagacatcgacatcgacgaa
cagagcttctgcaatgctttaggatgcctgaggaacctgagtagtggtggtgttatagcg
aggcgctgtatgagaaactgccccagactcatcgactcactcgtgatgtacactgagtcc
tgtgtgcgaaaggaaacccctgatgaaatgggtgtggagaactgtgtttgcattctccaa
aatctgacctttcaactggcgaaggagaagccagacgcttttgatcataacaattcaaga
gcagttcaaactgaggagaaaaatgccccagttggatgtttcagccctaggagcagcaag
attcaaaacgagtatcctttcctgaaacatccagccgattctgctgacactgacccatca
ggagtgaaatggttgtgccaccccagaaccattgacacctacctgtctttgctggaatca
tcccccaacaagatcactcaggaggcctgctgcggtgccctgcagaacctcactgccaac
agcaaagtgaacggtgatgtggaccaaattttgatggagaagttaaaaacttcacttccc
ttgaaggctctgatgaaatcagataacaagactattcggaagactgcttttgccttgctg
gacaacatgtcccgcagcaaagtgaagctcagcatggcacagcagatgttgcctgagctt
gtagacttcctcttagcccacacagaggatcacacaaagttgtttagtgatgaagaagct
gaaaaactttccaagatattgctgagactgctgctgtcagacactgaggtcacgaagaag
gtccttaataaagccatgatttctaagctgataaccttaagcaaccaaagacaggaaaca
tatccaaaagggagcacagcaaccagtgtgctgttgttcaacatctggaatgacaagaat
ttgcacaccgttgcgaaaaagacaggattttcgaaatctctctttgtcaacaaagtttct
ataagtgccaacgagatactcaaatccacggcttcaaatgaatga
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