| Entry |
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| Symbol |
arhgef1b
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| Name |
(RefSeq) rho guanine nucleotide exchange factor 1b isoform X3
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| KO |
| K12330 | Rho guanine nucleotide exchange factor 1 |
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| Organism |
kmr Kryptolebias marmoratus (mangrove rivulus)
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| Pathway |
| kmr04270 | Vascular smooth muscle contraction |
| kmr04810 | Regulation of actin cytoskeleton |
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| Brite |
KEGG Orthology (KO) [BR:kmr00001]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108235505 (arhgef1b)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
108235505 (arhgef1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:kmr04131]
108235505 (arhgef1b)
Membrane trafficking [BR:kmr04131]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108235505 (arhgef1b)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG16:complement(8462245..8501865)
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| AA seq |
1047 aa
MSIIGAEDEDFESDINDSRVTENQCAYFNNIELLKSHPTHLLVFLQHVILQFNPAPLLCY
LHADLIKSLSAKETKKQFIEFYNNFLDKGAILKVTVPPSVAYELDRTRPDLLSDDTQRRF
ALEIQNQQNSEITKQLEDFRQKRMMGMTLNENELLDVESHYPTDRIPMEMKEKSMAENLL
EKMFETQPQFVSDEEKWQSIFSSVAVYMKHFGIKSKSVDSKKSRRGFFGIPLVKGIKDGS
WNKPGPFHKGKKPPNSESGPKPESGVEKLSVDRKSINSGRGSVTDNSVIPPVRVSIGSGS
STSVSDVENPDGSGSKNSATINPEPLQFDGSSSNRLEPQAGSDSGNVSPGRGAGELTIVE
PTSPNETPSVESLETDRRKTSRKVARSESARVDRHSSRRRGSSRAKQSRSRSDVDLQPPS
CTTPVPLSPQHLHPFEALALNRDGPSQTPTSPSPQLEEIEPRLLEFEQDPPNWKELAPVD
AVKSLSKKEVKRQEVINELFATEHAHVRMLSVLQMVFVKPLEREALISTIELDAIFPGLD
EMLDEHYKFYENMKKLRINDNYIVKSISPTLLNRFDGAEGEWFQKLTARFSSHQTWALEQ
IKSMQKKEPRFNAFIQEAESKPQCRRLQLKDIIPTEMQRLTKYPLLLENIAKNTEDPVEK
GKIQDSAECCKKIVNHVNEEVRKVGNMLSLKEYQKKLDTSGLKTSNELYTEYKNIDLTQR
KMLYEGPLIWRVTKEKAIEVQGLLLGDLLVLLQKQDDKVVLKCQSKSNIAAQEGKQMMSP
IIKLNSVFLRDVATDRKAFYVIFTWDSGAQIYELVAQSVGEKKAWTEVLKIVVDDLKKSG
VVLNLPPGSGGAPFSPSLLNAPIIPAENGGLKSSSDHDRDSLTDDKSEQRHRLMDFLTEK
GLDVLGHSNNDQEKVANNALDEVMSLKRLLIGSISVSEDAQPDEEHEEEQSERSNQETEG
SQSTEGEVTDRGYMEVNTNRCEREDAETKDEDGSISAPMVLSQEIKDEVCRRLHSLEEQL
KKLQTVEEEHHKLQDALSEFSLEEGNF |
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| NT seq |
3144 nt +upstreamnt +downstreamnt
atgagcatcatcggggctgaagatgaggattttgagagtgatataaatgattcacgggtg
actgaaaaccagtgtgcgtacttcaacaacatcgagctgctgaagagtcatccgactcac
ctgctggtcttcctgcaacatgtcatccttcagtttaatcctgctcccctgctgtgttac
cttcatgctgacctcatcaagagcctcagtgctaaagagaccaagaagcagtttatagag
ttctacaacaacttcttggacaagggtgctattctcaaagtgacagtgccacctagcgta
gcctatgaactggaccggacccgcccagatttgctctcagatgacacccaacgacgtttc
gctctggagattcagaatcagcagaattctgaaataaccaaacagctggaggacttcagg
caaaagaggatgatgggtatgaccctcaatgagaacgagctgcttgatgtcgagagccac
tatcccaccgaccgcatcccgatggagatgaaagagaaatctatggctgagaacctgctg
gagaagatgtttgaaacgcaacctcagtttgtctcggacgaggagaaatggcaatccatc
ttttcctcagtggctgtctacatgaagcactttgggattaaatccaagtctgttgacagt
aaaaagtccaggcgaggtttctttggcatacctctggttaagggtataaaggatggctct
tggaacaagcctgggccattccataaagggaagaaaccaccaaattctgaatccggacca
aaaccggagtctggagtggaaaaactgtctgtggatcgtaaaagcatcaattcaggcaga
ggctctgtgactgataattcagtcattccccccgtcagggtgtctataggcagtggaagt
tctacctcagtgtctgacgtagagaatcctgatgggtcaggcagtaagaacagcgccacc
atcaacccggagccccttcagttcgacggttcatcaagcaatcgcttagagcctcaggcc
gggtcagacagtggtaatgtgtctcctggcaggggggcaggtgagcttaccattgtggag
cccacctcacccaatgaaaccccttcagtggagtcgttggagacagacagacggaagaca
agtaggaaagtggcacgcagcgagagcgcccgcgtggaccgccattcgtcacggcgtcgc
ggctcttctcgggccaaacagtcccgctcccgaagtgatgtggacctgcagcctccttct
tgtacgacacctgtcccactgtccccccagcaccttcacccttttgaggctctagcttta
aatcgtgacggccccagccagacgcccaccagtccctccccgcagctggaggagatagag
ccacgcctcctggagtttgagcaggacccgcccaactggaaggagctggcacccgtcgat
gctgtaaagagcctcagcaagaaggaggtcaagaggcaggaggtcataaacgagctgttt
gcaacagagcatgctcatgtgcgaatgctgagtgtccttcagatggtgtttgtcaagccg
ttggagagggaggcgttaatttccaccattgagctggatgccattttccctggccttgat
gagatgcttgacgagcactataagttctatgaaaacatgaagaagctgcgtataaatgac
aactacatcgttaaatccatcagccccacgttgctcaacagatttgatggtgcagaagga
gaatggttccagaagctgacagcccggttcagcagccaccaaacatgggctctggagcaa
atcaaaagcatgcagaagaaggaaccgcgctttaacgctttcattcaggaggcagagagt
aaacctcagtgccgcaggctgcagctcaaggacattattcccacagagatgcagaggctc
acaaaatatccactgcttctggaaaatatcgctaagaacacagaggaccccgtagaaaag
gggaaaatccaggatagtgcagagtgctgcaaaaagatcgtcaaccatgtcaatgaagag
gtcagaaaagtgggcaacatgttgtctctaaaggagtaccagaagaaactggacacatca
gggctcaaaaccagtaatgagctttatacagagtataagaatattgacttgactcagagg
aagatgctgtatgaaggtccattaatctggagagtcaccaaagagaaggctattgaggtg
cagggtctgttgctgggggacctgctggtgctcctgcagaaacaggatgacaaagtggtc
cttaaatgccaaagcaagagcaacatcgccgcgcaggaaggcaaacagatgatgagcccc
attataaagctgaactcggtttttctccgcgatgtggcgacagatcgaaaggctttctat
gtgatattcacctgggacagcggcgctcagatctatgagctggtagctcagtctgtcgga
gaaaaaaaagcttggactgaagtgctaaagatagtcgtagatgatctgaagaagagcgga
gttgtgttaaatctgcctcctgggagtggaggagctcctttcagtccctccttgctgaat
gccccgataatcccagctgagaatggaggtttaaaaagcagcagcgatcacgatcgggac
agcttgacagacgacaagtcggagcagaggcacaggctgatggatttcctgacagagaaa
ggcctcgatgtgctcggccactccaacaacgatcaggagaaggtggccaacaatgctctg
gatgaagtgatgtcactgaaaagattgttgatcggcagcatcagtgtgtcagaagacgca
cagcctgacgaagaacatgaagaggagcaatcagagaggagtaatcaagaaacagaaggc
tctcagtcaacagaaggcgaggtcacagacaggggttatatggaggtgaacaccaacagg
tgtgaaagagaagacgcagaaacaaaagacgaagacgggagcatcagtgcacccatggtg
ttgtcccaggagataaaggatgaagtgtgccggaggctgcacagcctggaggagcaacta
aagaaactacagactgtcgaagaggagcatcacaagctgcaggacgccctttctgagttc
tctctagaagaggggaacttctag |
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