KEGG   Kryptolebias marmoratus (mangrove rivulus): 108236172
Entry
108236172         CDS       T05608                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03420  Nucleotide excision repair
kmr04110  Cell cycle
kmr04114  Oocyte meiosis
kmr04120  Ubiquitin mediated proteolysis
kmr04141  Protein processing in endoplasmic reticulum
kmr04310  Wnt signaling pathway
kmr04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108236172 (rbx1)
   04120 Ubiquitin mediated proteolysis
    108236172 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    108236172 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    108236172 (rbx1)
   04350 TGF-beta signaling pathway
    108236172 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    108236172 (rbx1)
   04114 Oocyte meiosis
    108236172 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:kmr04121]
    108236172 (rbx1)
   03400 DNA repair and recombination proteins [BR:kmr03400]
    108236172 (rbx1)
Enzymes [BR:kmr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     108236172 (rbx1)
Ubiquitin system [BR:kmr04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   108236172 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     108236172 (rbx1)
   Cul2 complex
     108236172 (rbx1)
   Cul3 complex
     108236172 (rbx1)
   Cul4 complex
     108236172 (rbx1)
   Cul7 complex
     108236172 (rbx1)
   Cul8 complex
     108236172 (rbx1)
   Cul9 complex
     108236172 (rbx1)
DNA repair and recombination proteins [BR:kmr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      108236172 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      108236172 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 108236172
NCBI-ProteinID: XP_017272149
UniProt: A0A3Q3ATS9
LinkDB
Position
LG12:complement(16402495..16404305)
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagcgatggatgttgacacgccgagcggcactaatagcggcgcgagcaagaag
cgtttcgaagttaagaagtggaacgctgttgcgctgtgggcctgggacatcgtggtggat
aactgtgccatctgtaggaaccacatcatggatctctgcatagagtgtcaggccaaccaa
gcttctgcgacgtctgaggagtgcaccgtggcctggggtgtctgcaaccatgcctttcat
ttccactgtatttcacgttggctgaaaaccagacaggtgtgtcccctggacaacagagag
tgggagtttcagaaatacggacactag

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