Kryptolebias marmoratus (mangrove rivulus): 108236227
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Entry
108236227 CDS
T05608
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a
KO
K12473
low-density lipoprotein receptor
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03272
Virion - Hepatitis viruses
kmr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108236227 (ldlra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108236227 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108236227 (ldlra)
Membrane trafficking [BR:
kmr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
108236227 (ldlra)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Vgb_lyase
Motif
Other DBs
NCBI-GeneID:
108236227
NCBI-ProteinID:
XP_017272237
UniProt:
A0A3Q3AIY3
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All DBs
Position
LG12:complement(17887645..17902844)
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AA seq
905 aa
AA seq
DB search
MRLPRFSSLLLLLLICSLAHTNAFTTCGSSNFQCGNGNCITVRWVCDGTDDCGDGTDELP
ATCLVKTCKPTEFSCADRLNHCVPSTWRCDGKADCENEADEKNCAPKQCTSSEFRCKNGQ
CISSSFVCDSDVDCYDGSDEVSCPAVTCSSASFQCNNTVCIPRLWGCDGDTDCLDGSDEW
TENCGVKTPTPPTAHHCSSMEFHCASGECIHGSWKCDGESDCLDRSDEAGCAHSTCRPDE
FQCNDGTCIHGSRQCNSYYDCRDMSDEFGCVNVSRCEGPTRFKCRSGECISMERVCDNKR
DCRDWSDEPLRECGSNECLYNNGGCSHICKDLKIGYECLCPTGYSLADKKRCEDIDECTN
PETCSQICINQMGSYKCECEEGYQIDPATKACKAIGTIAYLFFTNRHEVRKMTLDKSEYT
RVIPRLKNVVALDMNMATKEIYWSDISQKKIYRTPMDLAEDSSHHHVVIGNDIDAPEGIA
FDWIHGNLYWTDSIRRTISVVTADGRHRKTLFHQNLSKPRAVVVDPHSNFIYWTDWGNPA
KIEKGGLNGVDRAALVTDNIVWPNGITLDLLNQRLYWVDSKLHTLSSIDVQGDGRRTLII
DEHQLAHPLALTVFEERVFWTDVSNNAILSANRLTGDDVAPVAEHLSSPEDIILYHNLKQ
PAGSDWCQISNSSCEFMCLPAPQIGSHPPKYTCVCPDNMMLARDMRTCVPAVPTPAVPVE
PQTPSTRPPHRTPVPPRTTPKTTLRPQVHTTTSVPPVMTSTTTKPLRRTSRPPVRTTTPL
PKKPSPQPEKPKILQTTTVAPVTLPSVRPVLATVIPTTASTTPIALYLVLPLAIVCLAVV
GGVLLWRNYRLQNTNTIHFHNPVYQKTTEDQVHIWKRHSFDGYEYPKRQIVSLDEEADNP
TFTEN
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgagactgccgaggttctcctccctgctcctgctgctcctcatctgcagcctggcccac
acaaatgcattcactacctgcggatccagcaatttccagtgtgggaacggtaactgcatc
acagtgaggtgggtgtgtgacggcacggacgactgcggagacggtactgacgaactccca
gctacctgcttggtcaaaacatgtaaaccaacagagttcagctgcgcagaccgcctcaac
cactgcgtaccgagcacctggcgttgtgatgggaaagctgactgcgagaatgaagctgat
gagaagaactgtgctcccaagcagtgcacgagctcggagttccgctgcaagaacggccag
tgtatctcctcttccttcgtgtgcgacagcgacgttgactgttacgatggcagcgacgag
gtctcctgcccggccgtcacctgcagctctgcgtcattccagtgcaacaacactgtttgc
attccccgcctgtggggctgcgatggcgacaccgactgcctcgacggctcggacgagtgg
accgagaactgcggcgtgaagacccctacccctcctaccgctcaccactgctcctccatg
gagttccactgtgctagcggcgagtgcatccatggcagctggaagtgcgatggagagtct
gactgcctcgatcgatcagatgaagctggctgtgctcattccacctgtcgcccagatgag
tttcaatgcaacgatggcacttgcatccatggcagccgccagtgcaacagttactatgac
tgcagagacatgagtgatgaatttggctgtgtcaatgttagtcgctgtgagggtccgacc
agatttaaatgccgcagtggggagtgtatcagcatggagagagtgtgtgacaataagcgg
gactgcagggattggtcagatgaacctctcagggagtgtggctccaacgagtgcctgtac
aacaatggcggctgctctcatatctgcaaagacctgaagatcggctatgagtgcttatgt
ccaactggatatagcctagctgataaaaaacgttgtgaagacattgatgagtgtaccaac
ccggaaacctgcagtcagatctgcatcaaccagatgggcagctacaaatgtgaatgtgaa
gagggttaccaaattgatccagcaaccaaagcttgcaaggccattggaacgatagcgtac
cttttcttcacaaaccgccatgaagtcagaaagatgactttggacaaaagtgaatacaca
agagtaattcctcgtctgaaaaacgtggtggctctcgacatgaacatggccaccaaagag
atctactggtcagacatttcccagaagaaaatctatagaactccaatggacttggctgag
gactcctctcatcaccatgtagtcataggtaatgacattgatgctcctgaaggaatcgcc
ttcgactggattcacggcaacctgtactggactgacagcattcgtaggacgatctctgtg
gtaacggctgatggtagacaccgcaaaacgctcttccaccaaaacttatcaaaaccccgt
gctgttgtggtcgaccctcacagcaacttcatttattggactgactggggaaatccagca
aagattgagaagggaggccttaatggagtggatcgtgccgctctggtcactgacaacatt
gtgtggcctaatggcatcacattagacttactaaaccagcggctctactgggtggactct
aagctgcacacgctctccagcattgatgttcagggcgatggtcgccgtaccctcatcatt
gacgagcaccagttggctcacccgctggcactcacagtatttgaggaaagggtgttctgg
acagatgtcagtaacaacgccatcctcagcgccaacaggctgaccggtgatgatgtcgca
ccagtggcagagcacctgtcatcaccagaggacatcattctttaccataacctcaaacaa
cctgctggaagcgattggtgtcagatatccaatagcagctgtgaattcatgtgcctacct
gcccctcaaataggcagtcatcccccaaaatatacctgtgtctgtcccgataacatgatg
ctagccagggatatgaggacttgtgtgcctgccgtgccaacccctgcagttcctgtagag
cctcaaaccccatccactcgtcctcctcatcgcacaccggtaccacccagaaccacacca
aagaccacgttaaggccacaggtccacaccactacttcagtgccccctgtaatgacaagc
accaccacaaagccactacggcgcacctcgaggcctcctgttaggaccaccacaccttta
ccaaagaagccctcacctcagccagaaaagcctaaaatcttgcagaccaccacagtggct
cctgtcaccttaccaagtgttcgaccggtactagctacagttatacccacaactgcctcc
accaccccaatagctctttaccttgtcttacctctagcaatcgtttgtctggcggtcgtt
ggtggtgtgctgctatggaggaactataggttgcagaataccaacacaattcactttcac
aaccctgtttatcagaaaaccacagaagaccaggtgcacatttggaagaggcacagcttt
gatggttatgaataccctaaaagacaaattgtgagtttggatgaagaggcagacaatcca
accttcactgaaaactga
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