Kryptolebias marmoratus (mangrove rivulus): 108237204
Help
Entry
108237204 CDS
T05608
Symbol
irf3
Name
(RefSeq) interferon regulatory factor 3 isoform X1
KO
K05411
interferon regulatory factor 3
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04620
Toll-like receptor signaling pathway
kmr04621
NOD-like receptor signaling pathway
kmr04622
RIG-I-like receptor signaling pathway
kmr04623
Cytosolic DNA-sensing pathway
kmr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108237204 (irf3)
04621 NOD-like receptor signaling pathway
108237204 (irf3)
04622 RIG-I-like receptor signaling pathway
108237204 (irf3)
04623 Cytosolic DNA-sensing pathway
108237204 (irf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108237204 (irf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108237204 (irf3)
04131 Membrane trafficking [BR:
kmr04131
]
108237204 (irf3)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
108237204 (irf3)
Membrane trafficking [BR:
kmr04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
108237204 (irf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
108237204
NCBI-ProteinID:
XP_017273959
LinkDB
All DBs
Position
LG17:15252448..15257758
Genome browser
AA seq
465 aa
AA seq
DB search
MAHPKPLLIPWLREQIDSCKYPGVQWTNPEQTEFCIPWKHALRQDSSNTDVLIFKAWAEV
SGNGQAPRDASIWKRNFRSALRVKGFKLVSDSKNDAANPHKVFRWPEESGSGANSSAGSQ
EQEDASLFDAFNTQNNQVVPFLDEDPFIPQDIVIPAECTAGHDILQECLNNLNISPGAEG
TAGFEFPSEQQQLQNQVVIGGHPLPGQQQDPVMFEGAASETGLSEQPACPMGGAVGGGYD
DGQYAAQFLQTVNKTRDGDSFKTHFRISVYYRGVKVSEQLVENEAGFCLVYRPELIGTVL
NPETGLSVVSLPQPNGILDQTQAMLTQRILDMLGDGLDVGVSGHVVYGQRRGDTKAFWSF
SKFDSSRQPQEISKLHPQPLYMFRDFIKGIIDFSNGGKCPPCFMYFCLGEKWPDPDGRPL
EKKLISVEVALTSMELLKNIAVEGGASSLQSVELQVSLEEMMELC
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggctcatccaaaaccactgctgatcccgtggctgcgggagcagatcgacagctgcaag
tatccaggtgtccagtggacaaacccagagcaaacagagttctgcatcccatggaaacat
gctctgagacaggactcctccaacactgacgtcctcatctttaaggcctgggctgaggtg
agtggcaacggccaggctccgagagacgcctcgatctggaagagaaacttccgcagcgcc
ctcagggttaagggcttcaaactggtgtcagattccaagaacgatgccgcgaaccctcat
aaagtctttcgctggccggaggagtcgggatcaggagctaattcttctgctggatcccag
gagcaggaggatgccagtttgtttgatgcttttaacacacaaaacaatcaggttgtgcca
ttcctcgatgaagatcccttcattccacaagacattgtgattccagcagaatgcacagcc
ggtcacgatattctccaggagtgtctaaataacctgaacatcagcccgggagcagagggc
acggcaggcttcgagtttccttctgagcaacaacagctgcagaatcaggttgtgattggt
ggacacccgttgcctgggcaacagcaggatccagtaatgtttgagggtgcagccagtgaa
actgggttgtctgagcaaccagcgtgtccgatggggggagctgtgggagggggctatgat
gacgggcagtacgcggcacagttcctccaaacggtgaacaagaccagagatggagatagt
ttcaaaactcacttcaggatatcagtgtactacagaggggtaaaggtctccgagcagctg
gttgagaacgaagctggattctgcctggtctacaggccagaactcatcggtacagttttg
aatcctgagacaggcctttctgtggtctctctgccacaacctaacggcattctggatcag
acccaagctatgctgacccaaaggatcctggacatgttgggcgacggtctcgatgtgggg
gtctcgggccatgtggtgtacggccagcgacggggtgacaccaaagctttctggagcttc
tccaagtttgacagcagcagacagccgcaagagatttctaaactgcacccacagccactc
tacatgttcagggactttatcaaaggaataattgatttcagtaatggaggcaaatgccct
ccctgcttcatgtacttctgtctcggagagaagtggcccgacccagacggcaggccgctg
gagaagaaactcatctcagttgaggtggccttaacttcaatggagttactgaagaacata
gctgttgaaggtggcgcctcctccctgcagtctgtggaactgcaagtgtcacttgaggaa
atgatggagctgtgctga
DBGET
integrated database retrieval system
