Kryptolebias marmoratus (mangrove rivulus): 108239698
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Entry
108239698 CDS
T05608
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04081
Hormone signaling
kmr04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
108239698 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108239698 (rapgef4a)
Membrane trafficking [BR:
kmr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
108239698 (rapgef4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
VTC
Vit_b-sht_shell
Motif
Other DBs
NCBI-GeneID:
108239698
NCBI-ProteinID:
XP_017278072
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All DBs
Position
LG6:11815432..11843390
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AA seq
1019 aa
AA seq
DB search
MVAAHTSSHSSESAEWMVCLDKRPAERSGEDVDIILARLRNVKAFERFHPSLLQQICLCG
FYECLEKGITLFRQGDIGTSWYAVLSGSLDVKVSETSRYQDAVTICTLGTGTAFGESILD
NTPRHATIVTREFSELLRIEQKEFRSLWEKYHHCMAGLLAPPYGVMESSCGSDRMPEKEN
ITNNVFVSVSKHPNKKSFLESPAKVLPKCTAQVLSEKILRAGKTLRYAILSSAPHMIRDR
KYHLKTYRQCCVGTELVDWQMQQSSCVHSRIQAVGMWQVLLEEGVLNHVDGETSFQDKYL
FYRFLDDEREDACVPDEEERRESQEELQDTLLFLSQIGPDALMRMILRKPPSERTADELE
IIYEELLHIKALSHLSTTVKRELAGVLIFESHEKAGTVLFNQGEEGTSWYIILKGSVNVV
IYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTV
RLKEHGQDVLVLEKSRNSVHGSSTSHYKYNIMSGTPEKILEHLLEMMRLDSQFTKSDSAL
DDFVLMHCVFMPNSQLCPVLTAHYHAEALQGSEQEQLDYTLNNKRRVIRLVVKWAAVNGD
HLQQEDRAFLEEFLVMVSNDVKVLPALRDQLSELERILKSNAEDARSSQKKHKVLLRQFS
MGDEKHQKCQPIKGDDEILFKVHCCDHTYTTIRVPVAASVREVIDAVADKLGSAEGLILV
GLSSAGEKSIFKPNDVSVFSTLSTNGRLFVCQRDQLDLLTPLPEQEGPSSGSLASFELMS
SKDVAYHITSYDWELFHCVHELELIYHTFGRQYVKKTTVNLDLFLRRFNEIQFWVITEMC
LCPQLNKRVQLLKKFIKIAAHCKEYKNLNAFFAVIMGLSNPAVSRLSQTWEKLPSKFKKF
YEEFENLMDPTRNHRAYRLTVSKLDPPLIPFMPLMIKDMTFTHEGNKTFIDNLVNFEKMR
MIANTVKIVRYCRSQMFSPDSPLAGKHHPDVWTYVRQLNVIDNQRTLTQLSHGLEPRRS
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggcgcacacctcgtcccattcgtcggaatctgccgagtggatggtttgtctg
gataagagaccggcagagcgctcaggtgaggacgtggacatcatcctggctcgtctgaga
aacgtgaaggccttcgagcgtttccaccccagcctgctgcagcagatttgtctgtgcggc
ttctacgagtgcttggagaaagggatcaccctgtttcgccaaggagacatcggcaccagc
tggtacgcggtgctctccggctcactggacgtgaaagtgtctgagacgtcaagatatcag
gatgctgtcaccatatgcaccctggggactggcacggcgttcggggagtcgatcctggac
aacacccccagacacgctactattgtcactcgggaattcagcgagctcctacgcatcgaa
caaaaggagttcaggtctctgtgggagaaatatcatcactgcatggctggactactcgcc
ccaccttatggtgtgatggaaagcagctgtggttctgacaggatgccggaaaaagagaac
ataaccaacaatgtgtttgtttcagtctccaagcatccaaataagaagtctttccttgaa
agtccagccaaagtcctgcctaaatgcacggctcaggttctttctgagaagatcctccgt
gccgggaagactctccgttacgccatcctctccagtgctccacacatgatccgagacagg
aagtaccatctgaagacatacaggcagtgttgtgtggggacagagttggttgactggcag
atgcagcagagctcctgcgtccactctcgtatccaggctgtgggcatgtggcaggtgctg
ctggaggaaggcgtcctgaaccacgtggacggggagacgagtttccaggacaagtacctt
ttctaccgcttcctggatgatgagcgggaggacgcttgtgtccccgacgaggaggagagg
agggagagccaggaggagctgcaggacactctgctcttcctctcgcagattggaccggat
gcactcatgaggatgattctgaggaaacctccctctgaaagaacagcggatgagttggag
atcatatatgaagaactgctccacataaaggccttatctcacctgtcgaccactgtaaag
agagaactggctggagttcttatctttgagtcccatgaaaaggcggggacagtgttgttc
aaccagggggaggagggcacatcctggtacatcatcctgaagggttcagtcaatgttgtc
atctatgggaaaggagtcgtctgcactctgcatgaaggagatgacttcgggaagctggcg
ctggtcaacgacgccccccgtgctgcctccatcgtcctgcgagaggacaactgtcatttc
ctgagggtggacaaggaggactttaaccggattttaagggacgtggaggcgaacactgtc
cgcctgaaggagcatggtcaggatgttctggtgttggagaagagtcgaaactccgtccat
ggatcctcgacatctcattacaaatacaacatcatgtctgggactccagagaagattttg
gagcatcttcttgaaatgatgcgattggattcgcagttcaccaagtcagactcagccttg
gatgattttgtactcatgcactgcgtcttcatgcccaacagtcagctgtgtccagtgctg
acagcccactaccacgccgaggccttgcagggctctgagcaggagcagctggactacaca
ctgaacaacaagcgcagggtgatccgcctggtcgtgaaatgggccgctgtgaacggagat
cacctgcagcaggaggacagggccttcctggaggaatttctcgtgatggtatctaatgat
gtcaaagtgcttccagccctcagggatcagctttcagagctggagagaattttaaagagc
aatgcagaagatgccagatcctcacagaaaaagcacaaagtccttctgcgacagttcagc
atgggagacgagaagcaccagaaatgtcagcccatcaagggtgatgatgaaattctgttc
aaagttcactgctgtgaccacacctacaccaccatccgggtccccgtagccgcctcggtc
agggaggtcatcgacgctgtagccgacaagctggggtcggcggagggtctgatcctggtc
ggcctcagctcagcgggagagaaatctatcttcaaaccaaacgatgtttctgtcttctcc
acgctcagcacaaatggacgactctttgtctgccagagggaccagctggatttgttgaca
cctctacctgagcaagagggtccttcctcagggtccctggccagttttgagctgatgagc
tccaaagatgtggcgtaccacataacctcctatgactgggagcttttccactgcgttcat
gagctcgaactcatctaccacacatttggaaggcagtacgtgaagaaaaccacagtgaac
ctggatctgttcctgaggaggtttaatgaaatccagttttgggtgatcacagagatgtgt
ctgtgtcctcagctgaacaagagagtgcagctcctgaaaaagttcatcaagattgctgct
cactgtaaggagtacaagaatctaaacgccttcttcgctgttattatgggcctgagtaac
ccagcagtgagcaggctgagtcaaacctgggagaagcttcccagcaagttcaagaagttt
tatgaggaatttgaaaacttgatggacccaaccaggaaccacagggcgtatcgactcaca
gtctccaaactggaccctcccctcattccattcatgccactgatgataaaagacatgaca
ttcacacatgagggaaacaaaacatttatcgacaatttggtcaattttgagaaaatgcgg
atgattgcgaacactgtgaagatcgtgagatattgcaggagtcaaatgttcagtccagat
tctccgctggctgggaagcaccaccctgacgtttggacttacgttcgtcagctcaacgtg
atcgacaaccagaggacgctaacgcagctctctcatggacttgagccccgcaggtcctaa
DBGET
integrated database retrieval system
