Kryptolebias marmoratus (mangrove rivulus): 108240544
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Entry
108240544 CDS
T05608
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04010
MAPK signaling pathway
kmr04020
Calcium signaling pathway
kmr04510
Focal adhesion
kmr04540
Gap junction
kmr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
kmr01001
]
108240544 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
kmr04090
]
108240544 (pdgfrb)
Enzymes [BR:
kmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
108240544 (pdgfrb)
Protein kinases [BR:
kmr01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
108240544 (pdgfrb)
CD molecules [BR:
kmr04090
]
Proteins
108240544 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
VEGFR-1-like_Ig-like
C2-set_2
Adeno_E3_CR1
Haspin_kinase
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
108240544
NCBI-ProteinID:
XP_017279585
UniProt:
A0A3Q2ZQI5
LinkDB
All DBs
Position
LG9:complement(16303122..16340549)
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AA seq
1107 aa
AA seq
DB search
MRRVSAFVLHLTLTFTALVYFGAEVSCLDITPDDNKFVLTRGSTLTLTCSGFSEVIWEFK
RDSMSVYLKGQDENGHGYYEIVQRDAVSSVLTLKNVSWMHTGVYQCVDVNSRETKDVTVF
VPDPEEWFVMSPHGMVAKTSEESVVPCVVTNPNITVTLHERDTDRLIAGLYAPDEGYKAP
LEDRTYVCRGELNGEVKDSQDFNVISIIVSETIDPYVNASKTVLKQGEALSVNCTVHGSD
LVLFSWDTPNPEQIEAEAQTYVSPPMSMHSCLFFPHATVAHSGNYACHVFESVLSQTASA
SIDIIVLEHGFVDVTPPQLQNVSAKLQENVELRVDFKAYPPPQVLWTKDGSSIKGDKTIV
IRQEHEIWYVTILTLVRVRTEQKGLYSVLITNGDDTKQVVFDLEVQVPAQIKDLTDHHLP
GKKHLVTCVAEGFPAPTVQWYSCDSMLKCSNQSAVWQPLIPQAEELSIHTNVTYNSTRKI
SQVRSQVIFHKPQHVTVRCETVNQAGLVSRRDVKLVSSTLFSQVTVLAAVLALVVIIIMS
ITILIAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEIARENLVLGRTLGS
GAFGRVVEATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLL
GACTKHGPLYLVTEYCRYGDLVDYLHRNKHTFLQYYAEKNQDDGCLISRGSTPLSQRKGY
VSFGSESDGGYMDMSKDEPSIYVPMQEQLDTIKYADIQASPYESPYQQDLYQEQGGIRLD
LVISDSSSLTYDDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLAR
DIMHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPM
NEIFYNALKRGYRMAKPAHASDEIYEIMKKCWDEKFEKRPEFSLLVHNVGNMLMDSYKKR
YNQVNENFLKSDHPAVARTKPRLSSPFPNTNPALGSPPPPIALTSSPLVPPNQGRRPGER
RPEADTQEVINSFNEYIIPIPDPKPDEGFADVPSESPVSSLALEEETDSVSQDTAETLPE
EDRPEDTSEKDALLGFTGTPEVEDSFL
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgaggagggtgtcagcattcgtgcttcacctgacacttacatttacagctttggtgtat
ttcggcgctgaagtgtcctgccttgatatcacacctgatgacaacaagttcgtcctgact
cgaggctccactctcaccctgacctgctccggcttctctgaggtcatttgggaattcaaa
agggacagcatgtccgtctatctgaaagggcaagatgaaaatggccatggatattacgaa
attgtgcaaagggacgccgtatccagtgtcctgacgctgaaaaatgtgagctggatgcat
actggtgtgtatcagtgtgtggatgtcaactccagggaaactaaggatgtaacagtgttt
gttccagatcctgaggagtggtttgtaatgagcccccatggcatggtggcaaaaaccagt
gaagaaagcgtcgtcccgtgtgtggtcaccaacccgaacatcactgtcaccctgcatgag
cgggacacggaccggctcattgcaggcctgtacgctcccgatgaggggtacaaggcgccg
ctggaggacaggacatacgtgtgtcgtggagagctgaacggggaggtgaaagactcccag
gattttaacgtcatcagtattatcgtgtctgagaccatcgatccttacgtcaacgcctca
aagacggtcctgaagcagggcgaagcgctgtctgtgaactgcactgtgcacggatccgac
ctggtgctgttttcctgggatactcccaacccggagcagattgaggctgaggctcagacc
tacgtctcgccgcccatgagcatgcactcctgcctcttcttccctcacgccaccgtggcc
cacagcggaaactacgcctgccatgtcttcgagagcgtcctcagccaaacagcgtctgcc
agcatcgacatcatcgtgctcgaacatggttttgtggatgtgacgcctcctcagcttcag
aacgtttcagccaagcttcaggagaacgtggagctgagagtggacttcaaggcttaccct
cccccacaggttctctggaccaaggatgggtcctccatcaagggagacaaaaccatcgtc
atcagacaagagcatgaaatatggtacgtgaccattctaaccctggtgagggtgaggacg
gagcagaagggcctctactctgtcctcattaccaacggagacgacacaaagcaagttgtc
ttcgacctggaagtccaagttcctgctcagattaaagacctgaccgaccaccacctgcct
gggaagaaacacttggtgacctgcgtagccgaggggtttccagctccaaccgtgcagtgg
tacagctgtgacagcatgctcaagtgtagcaaccagtcagctgtgtggcagccgctaatc
ccacaggcggaggagctgagcatccacaccaacgtcacctacaacagcacacgtaaaatc
agccaggtgcggagccaggtgatcttccacaaacctcagcacgtcacagttcgctgtgag
accgtcaaccaagctgggctcgtcagcagaagagatgtcaaactggtgtccagcaccttg
ttctcccaggtgacagtgttggctgctgtcttagccctggtggtcatcatcatcatgtct
atcaccatcctcatcgctgtgtggaggaagaaacctcgctatgagatcaggtggaaggtg
atcgagtccgtgagtcaggacggacacgagtacatctacgtggatcccatccacctgccg
tatgacctggcctgggagatagcccgagaaaacctggttctgggtcgcactcttggatcg
ggagcctttggcagggtggtcgaggcgactgcttacggtctcacgcattcccagtccagc
acaaaggtggcagtgaaaatgctgaaatccacagcccggaggagtgagactcaggccctg
atgtcggagctgaagatcatgagtcacctcggccctcacctcaacatcgtcaatctgctt
ggagcgtgcaccaagcacggccctctctacctggttaccgagtactgtcgctacggcgac
ctggtggactacctgcacaggaacaagcacaccttcctgcagtactacgccgagaagaac
caggacgacggttgcctcatttcaagaggaagcacccctctcagtcagaggaaaggctat
gtgtccttcgggagcgagagcgacggagggtacatggacatgagcaaagacgagccttcg
atctacgtgcccatgcaggagcagttagacaccatcaaatacgcggacatccaggcttct
ccgtacgagtccccctaccagcaggacctctatcaggagcaaggcggtatcaggctggac
ctggtgatcagtgactcttccagtctcacctacgatgatctcctgggcttcagctaccag
gtggcgaagggaatggagttcctggcctccaagaattgcgtccatcgggatttggctgcc
aggaatgttttgatctgtgagggtaagctggtgaagatttgcgactttggcctggccaga
gacatcatgcacgactccaactacatctccaaaggcagtaccttcctgcctctgaagtgg
atggcaccggagagcattttccataatttgtacaccactctgagcgatgtgtggtcttac
ggcatccttctttgggaaattttcaccctgggaggaaccccatacccagacttgcccatg
aatgaaatcttctacaatgctttgaagagaggctaccgaatggccaaacctgctcacgct
tctgatgaaatttatgagatcatgaagaagtgctgggacgaaaagtttgagaagaggcct
gagttctccctcctggtgcacaatgtggggaacatgctgatggacagctataagaagaga
tacaaccaagtgaatgaaaacttcctgaagagtgaccaccctgcagtggcccgcaccaaa
ccccggctgtcctcgccctttcctaacaccaaccccgcactcggctctccccctcctccc
atcgccctcacctcctcccctctggtccctcccaaccagggccggaggcctggagagcgc
aggccagaggctgacacacaggaagtcataaattcgtttaacgagtacatcattcccatc
ccggacccgaagccggacgaaggtttcgctgacgtgccgtcagaaagtcctgtaagctct
ctggctctggaggaggaaaccgattctgtgtcccaggacacagctgaaactcttccagag
gaggaccggccggaggacaccagcgagaaagacgctctgctgggcttcacggggacgcct
gaggtggaggacagcttcctgtag
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integrated database retrieval system
