Kryptolebias marmoratus (mangrove rivulus): 108241725
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Entry
108241725 CDS
T05608
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108241725 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108241725 (c9orf72)
Membrane trafficking [BR:
kmr04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
108241725 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
108241725
NCBI-ProteinID:
XP_017281586
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All DBs
Position
LG10:20097136..20108411
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AA seq
463 aa
AA seq
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MSSGCPPQSPAVAKSEVAVEGECPLLAATFAYWDNILGPRVRHIWVPKGDQLMFLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQT
ELAFYLPLHTICVERLKHVIRKGRIWMQKGYNIISVLSLEIVPIMELLASMKSHSVPEDI
DQIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSIVVGSNPDKVNKIVQTLCLFLTPA
ERKSSRLCRANSSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDIDINTVKQM
PPCHEHTYNQRRYMRSELSALWKTDSEEDIPPDTIIHTDETFTPDLNIFQDVTHKDTLVQ
CFINEVFMLKPGLSLRSSYLAQFLLLLHRKALTLLKYIEDETQKGKKPFRSLRNLKTDLD
LTTEGDLNIIMAFAEKLKAGLHSFVFGKSFYTSVQERDALMSF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggctgtccgccccaatcacctgctgttgcgaagtctgaggtcgccgtggag
ggagaatgtccgctgctggccgccaccttcgcctactgggacaacatcctgggtccgcgc
gtgcgccacatctgggtaccgaagggcgaccagctgatgttcctcagcgatggagaggtc
accttcctggccaatcacacgctcaacggggagatcctgagaagtgcggagtgcggcgcc
gtggatgtgaagttcttcgtcctggcagagaagggtgtcatcattgtgtctcttatcttt
gacggcgagctgaagggggataagaatacgtgtgccttgtccatcatcctgcctcagacg
gagctggccttctacctgccgctccacaccatctgtgtggagagactaaagcacgtaatc
cgcaaaggacgcatttggatgcagaagggctataacatcatctcggtgctgagcttggag
attgtccccatcatggagctgctggcctcgatgaagtcccacagcgttcctgaagatata
gatcagataaaagacactgtgctaaatgatgatgacatcggggacagctgccatgaggat
ttcctccacaaagccatcagctctcatctgcagacgtgcggctgctcaatcgtggtcggg
agcaacccggacaaagtaaataagatcgtgcagactctgtgcctcttcctcacccccgct
gagaggaagagctctcgcctctgcagggccaactcttccttcaaatatgacaccggcctg
tttgttcagggtctgctgaaggactccacaggcagcttcgtcctgccgttccgccaggtg
ctctactctccttaccccaccacgcacatcgacatcgacatcaacacggtgaagcagatg
ccgccgtgtcacgagcacacgtataaccagcggcgctacatgcgctctgagctgagcgcc
ctctggaagacggatagcgaggaggatatacctccggacactatcatccacaccgacgaa
accttcacacctgacctaaatatattccaagatgttacacataaagacactttggtccag
tgttttataaatgaggtgttcatgctgaagccgggcctgtccctgcggagctcctatctg
gcccagttcctgctgctgctccacaggaaggccctcacgctgctcaagtacatcgaggac
gaaacgcaaaaagggaagaagccgtttcgatcgttgcgtaacttgaagacggacctggac
ctgacgacggaaggagacctgaacatcatcatggcatttgctgagaagctgaaggccgga
ctgcactcctttgtgttcgggaagtcgttctacaccagcgttcaggagcgagacgcgctc
atgagcttttga
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