KEGG   Kryptolebias marmoratus (mangrove rivulus): 108242339
Entry
108242339         CDS       T05608                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108242339 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:kmr03041]
    108242339 (smndc1)
Spliceosome [BR:kmr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108242339 (smndc1)
 Complex B
    108242339 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    108242339 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2730 PUA_4 RskA_C
Other DBs
NCBI-GeneID: 108242339
NCBI-ProteinID: XP_017282622
UniProt: A0A3Q3BBB3
LinkDB
Position
LG22:complement(16725729..16729356)
AA seq 238 aa
MSEDLVKQLSSYKAQLQQVEVALSTDPDNEDLRKLQKDLQEVIDLTKDLITSQPLDGAST
ASSSAAVPVKQHWKIGDKCLATWSQDGQVYEAEIEEIDRENGTAAVTFSEYGNAEMIPLQ
NLKAVEEGKRSEEDGGMKPKSRKEQIAEQREYKKKKAQKKVQRMKELEQEREDQKSKWQQ
FNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggaggatctggtgaaacaattgagcagctacaaagcccagctgcagcaagtagaa
gttgcattatctactgatccggacaatgaagaccttcgcaaactccagaaggacttgcag
gaagtcatcgacctgacgaaagatctcataacgtcacagcccctcgatggcgcttccact
gccagtagttcagccgcggtgcccgtgaagcagcactggaagattggagacaagtgtttg
gccacgtggagtcaggatggacaggtgtatgaggccgagatcgaggagatagaccgagag
aacggcaccgcggccgttaccttctctgagtacgggaatgctgaaatgattcctctgcag
aacctcaaagcggtagaggaggggaagcgttctgaagaggatgggggtatgaagccaaaa
tcaaggaaagagcagatagccgagcagcgagagtataagaagaagaaagctcagaagaag
gtccagaggatgaaggagttggagcaggagagggaggaccagaagtcaaagtggcaacag
ttcaacaacaaagcctattcaaagaacaagaagggacaggttaagaggagcatatttgca
tccccagaaagcgtaaatgggaaggtgggagttggaacttgtggtattgcagacaaaccg
atgacccagtacaacgacacgtccaaatacaacgtcagacatctaatgccacaatga

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