Kryptolebias marmoratus (mangrove rivulus): 108242471
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Entry
108242471 CDS
T05608
Symbol
abcd4
Name
(RefSeq) ATP-binding cassette sub-family D member 4
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr02010
ABC transporters
kmr04146
Peroxisome
kmr04977
Vitamin digestion and absorption
kmr04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108242471 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108242471 (abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
108242471 (abcd4)
04980 Cobalamin transport and metabolism
108242471 (abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108242471 (abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kmr02000
]
108242471 (abcd4)
Enzymes [BR:
kmr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
108242471 (abcd4)
Membrane trafficking [BR:
kmr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
108242471 (abcd4)
Transporters [BR:
kmr02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
108242471 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
FtsK_SpoIIIE
AAA_7
AAA_5
NACHT
DUF87
DUF6079_1st
nSTAND1
T2SSE
Motif
Other DBs
NCBI-GeneID:
108242471
NCBI-ProteinID:
XP_017282803
UniProt:
A0A3Q3ARZ6
LinkDB
All DBs
Position
LG19:11162545..11169743
Genome browser
AA seq
611 aa
AA seq
DB search
MPRQEKTKGTGRKRPKLDWRFVQRFCSIQKVLFPSWSSQSALMFGTLLGVTLTEQLIIYQ
VGVLPSHFYNVLADKDYSGFRSLVGAALVLILLNSTLKSLDQYICNQMYVSWRRTLTESL
HSAYFQGRVYYILNVLREDIDNPDQRISQDVERFCKQMSTMASRLIISPFTISYYTYQCF
HSTGWIGPVSIFGYFVVGTIANKILMGPIVSTLFEQEKLEGDFRFKHMQIRVNAESAAFY
RAGKVEHVRTNRRLQTLLQTQKSLINKELWLYIGVNTFDYLGGFLSYIIIAIPIFTGVYD
GLTPGELSALISKNAFVCIYLINGFTQLIDLSTTLSDVAGYTHRIGELMEVMDDVLRKQC
DYDPASGESYDFDSDFNVHAGPVDTAFILDHLSYKSPFSDQLLVEDLSLKISQGAHLLVV
GNTGTGKTSLLRVLNRLWEAHSGFVQMTTCFGPRGTLFLPQKPYMTDGTLREQVIYPLKD
IYPASGSVDDDRIIQFLELAGVSSLLKRTGGLDEEVDWNWSDVLSPGEMQRLSFARLFYL
QPKYAILDEATSALTEEAEAQLYRLCKQLGMTLVSLGHRSSLVKYHDVQLKLCGGGRWEV
TKLKGAREEAT
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggcaggagaagacaaaaggaacaggaagaaaaaggccaaaactagactggagg
tttgttcagaggttctgcagcatccagaaagtcctgtttccatcatggtccagtcagagt
gctctgatgttcgggacgctgctcggtgtcactctgacagagcagctgatcatttaccag
gtgggcgtcctccccagtcacttctacaacgtgctcgcagacaaagattactccggcttc
aggagcctggtgggagccgccctggtgctcattttgctcaactccacactgaaaagtctc
gaccagtacatctgcaaccagatgtacgtcagctggaggaggacgctgacggagagcctc
cactcggcctacttccagggcagagtctattacatcctcaacgtgctccgagaggacatc
gataaccctgaccagcggatcagtcaggatgtagagcgcttctgtaagcagatgagcacc
atggccagccgcttgatcatctcgccgttcaccatttcctactacacctaccagtgcttt
cacagcaccggctggatcggtcctgtgagtatctttggatacttcgtcgttggaacgatc
gccaacaaaatcctcatgggtccgattgtgtcgaccctgttcgagcaagagaaactggag
ggggacttcagatttaagcacatgcaaatccgtgtcaatgcagagtctgcagcgttttac
agagcaggaaaagtggagcatgtgagaacgaaccgacgactgcagacgctgctgcagact
cagaagagtctcataaacaaggaactctggctctatatcggggtgaacacctttgactac
ctcggaggtttcctcagctacattataatcgccattcctatcttcactggtgtttacgat
gggctcactcctggtgaacttagtgcactcatcagtaagaacgcctttgtgtgcatctac
ttaataaacggcttcacacagctaatagacctgtcaacgactctgtcagatgtggccggt
tacacccacaggatcggggagctgatggaggtgatggatgacgtcctgaggaagcagtgc
gactacgatcctgcgtcaggagaaagctatgactttgacagcgacttcaatgtccacgcg
ggccccgtggacacggccttcatcttggaccatctctcctacaaatctccgttctcggac
cagctgctggtggaggatctgagtctgaaaatcagtcagggtgctcatctgctggtggtg
ggaaacacgggcaccgggaaaacgtcgctgctgcgagtcctcaaccggctctgggaagcc
cacagcggtttcgttcagatgaccacatgtttcgggcctagaggaacgctcttccttcca
cagaaaccctacatgactgatgggactctgcgcgaacaggtgatttatccactgaaggat
atttaccctgcatcagggtcagtggacgacgacagaattattcagttcttggaactggct
ggagtgtccagccttctgaagaggactggagggctggatgaggaggttgactggaactgg
tctgacgttctgtctcccggtgaaatgcagcgcctctcctttgcacggctcttctacctg
cagccgaaatatgccattttagatgaggccaccagcgctttgactgaggaagccgaggca
cagctgtacagattgtgcaaacagctgggcatgactttggtcagtctgggacaccggagc
agtctggtaaagtaccacgacgtccagctgaagctgtgcggaggcggccggtgggaggtg
accaaattaaaaggagccagagaggaggcgacgtga
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