Kryptolebias marmoratus (mangrove rivulus): 108242618
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Entry
108242618 CDS
T05608
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108242618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108242618
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
108242618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
108242618
NCBI-ProteinID:
XP_017283066
LinkDB
All DBs
Position
LG5:complement(3049801..3062264)
Genome browser
AA seq
958 aa
AA seq
DB search
MQSSEISAAAAAKKKEKKEKRGSGTEPTERPGGRRVHPPPGAAAGGGRETPSGDAMETDG
EQSQQGASTNGSPASGASSRPSPMNSMSLYERQAVQALQALQRQPNAAQYFQQLMLQQQI
NSAQLQNLAAVQQVKATLAASRQSSPSSSTSSSSQTTSTTSASVTSGSSSSTSSRPLGAS
ATSTISQSVLLSGTAGGQGQMYLRVNRSLRTPIPSQLIFMPGSTATAAVATVTQQPQEVT
SASSSSSQLDNDQVQNLAIRGVSSPKGVKTEAPEKSDSAAYSLVQPSHQSTTQSPTKPSP
QPPHIKIPTYPQPSNLKAHLSSSSGVSSSSSSSTSSIPLSQLLLHGTRTLTTGTTAPTTA
HTLVLTSNATSQPHGYPVGTATIKPAVNAQTLVVQPLQKSSLGAEKSGHANGPVPIQPKT
LQGLRLPLQLPSRNPPPILPAPTPSSSSNHPPQPPHIPVQIVGARQSTLGGAQALALARG
SCSQEGAAVLSSSSSLLTMVASIASREGGVVGRGVGLKTLQTPQEAPPLAQGSQVHPQAS
QSSAQSQNGPLATPASSQSTTISSPPPSQSRSTQSLPQVTEEQRGASAAVTANGDSSGGQ
TPQGKQISTSLKRKSDSSSANDEDGPSPPRLQPVRDHSSMPPSNPICAGSASPPASSSPT
PALSVSRGVCGQGERASPPQAVVKPQVLTHLIEGFVIQEGAEPFPICGPVKDSAGEDLTD
DSPDTNQSETVTTATVLKCEYCKNFAPASQFRGTKRFCSMSCAKSMYWFPRYNVSFRQHF
SVRQSHSQRQDRDQDQDQDHFSNSDEEGGIARRRVPRRTSSEIASAKIAGRPIPAKVRKC
RSESSHSDEESSGEEDEDDAVSLSPASSASCHQPPPPVETESSAPSCLPASPSQWSVEEV
SRFISSLQGCEELASQFLSQEIDGQALLLLKEEHLMSTMNIKLGPALKICAHINNLRD
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagtgaaatctctgctgctgctgctgcaaagaagaaggagaagaaggagaaa
agaggcagcggcaccgagcccaccgagcgcccgggaggccgccgagtccacccgccgccg
ggagccgctgcaggaggaggccgagaaaccccgagcggtgacgccatggagacggacgga
gagcagagccagcagggagcctcgaccaatgggagcccagcttctggggcgagctcccgg
ccctcacccatgaactccatgtctctgtatgaaaggcaggcggtgcaggccctccaggcg
ctgcagagacaacctaacgcagcgcagtacttccagcagctgatgttgcagcagcagatc
aacagtgcccagctgcagaacctggctgctgtgcaacaagtgaaggccactctggcagcc
agccgccagtccagtccgtccagcagcaccagcagctcttctcagaccaccagcaccaca
tctgccagtgtaacatctggatcaagttcttcgaccagcagccgtccgttaggcgcctca
gcgacgtccacgatcagccagtcggtgctgctgagtgggacggcaggcgggcagggacaa
atgtacctgagggtcaaccgctccctgaggacgcccatcccctctcagcttatcttcatg
cctggtagcacagcaaccgctgccgtggcgactgtgacccagcagcctcaggaagtaact
tcagcttcctcgagcagcagccagttagataatgaccaggtgcaaaatcttgccatccga
ggagtttcaagtcctaaaggtgttaaaactgaagctccagagaagagtgactcagctgcg
tactccctggtccagccctcccaccagtcaaccacccagtctcccactaaaccgagtcca
cagccaccccacatcaaaatccctacctacccccagcctagtaacctcaaagcccacctt
tcttcctcttccggtgtctcgtcttcgtcctcatcctctacctcctccattcctctctcc
cagctcttgcttcatggaactcgaaccctgaccacggggaccacggcccccacaacagca
cacactctggtcctgacgtccaatgccacatctcagccccacggttacccggtaggcacg
gcaaccatcaaaccagcagtgaacgctcagactttggtggtgcagcctttgcagaagtcc
tcactcggtgctgagaaatcgggacacgccaacggacccgtccccatccaaccaaaaact
ttgcaaggactccggctgcctcttcagctgccttctaggaaccctcctcccatccttcct
gccccaacaccatccagcagctctaaccaccctccccagcctccgcacatccctgttcag
atcgtgggggccaggcagagcacgctgggaggggcccaggctctcgcgctcgcccgcggc
agctgcagccaagagggagctgccgttctcagcagctcgtccagcctgctcaccatggtg
gcgtccattgcctccagggagggtggggtggtcgggcgaggggtggggcttaaaaccctt
cagactccccaggaggcacccccgctggctcaggggtctcaggtgcatccgcaggccagt
cagagctctgcacagagtcagaatggacctttggcaactcccgcctcctcccagtccaca
accatttcatctcctcccccctcgcaatcacgctcaacacaatccctcccccaggtgact
gaagagcagagaggagcatcagctgctgtgacggccaatggagactcgtcgggaggtcag
acgccacagggaaagcagattagcacgtctctaaaaagaaaatccgactccagttcagcg
aatgatgaagatggcccatctcctcctcggctccagccggtcagagaccactcctcgatg
ccgccatccaatcccatctgtgcaggctctgcttctccgcctgcctcctcctctccgacc
ccagcgctctctgtgtcccggggggtctgcggtcagggggagagagcgtcgcctcctcaa
gctgttgttaaaccgcaggtccttactcacctcatcgaagggtttgtcatccaggaagga
gcggagcctttccctatatgtggtccggtgaaggactctgctggggaggatttaactgac
gacagtccagacactaaccagtcagaaactgttaccacggcaacagtgctgaagtgtgag
tactgcaagaactttgctcctgccagccagttcagaggcaccaaaaggttctgctccatg
tcgtgtgccaaaagtatgtattggttccccaggtacaacgtcagcttcaggcagcacttc
tctgtgaggcaaagtcacagccagcgtcaggatcgggatcaggatcaggatcaggaccac
ttctccaactctgacgaggaaggaggaattgccaggaggagggttccccgcaggacgagc
tcagaaatagccagcgcaaagattgcagggagacccatacctgccaaggtgagaaagtgc
cgatcagagtccagccactcagacgaggagtccagcggagaggaggacgaggatgacgcc
gtgtctctttcgcctgcctcttcagcttcctgccaccagccgcctcctccggtggaaaca
gagagctcagcacccagctgccttcccgccagcccctcccagtggagtgtggaggaagtg
tcacgctttatttcttctctacaaggctgcgaggagcttgcctcccagttcctgtcgcag
gaaatcgacgggcaggctttgctcctgctgaaggaggagcatctcatgtccaccatgaac
atcaagttaggaccggccctgaagatctgcgctcacatcaacaatctgagagactga
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