Kryptolebias marmoratus (mangrove rivulus): 108243068
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Entry
108243068 CDS
T05608
Name
(RefSeq) protocadherin gamma-C5
KO
K16497
protocadherin gamma subfamily C
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108243068
Cell adhesion molecules [BR:
kmr04515
]
Cadherins
Protocadherins
108243068
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
BppU_N
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
108243068
NCBI-ProteinID:
XP_017283768
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Position
LG9:17483793..17487027
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AA seq
822 aa
AA seq
DB search
MTKTMGYRDWRWLVLWWHIFFLLWSTIDGQTRYSIPEELKQGSVVGNIAKDLGLSSSDMF
DRNLRVASEAGEQYFSVDAGKGELLVNDRIDREALCGQSASCVLPLQIVIENPLHLHRLE
IEIKDINDNAPIFLTKEMFLKIAESAAVGTRFSLESAEDLDFGSNSVKSYTLAKNECFTL
KLKEVEDGRAVPELVLEKPLDRERKAVHQLRLTAVDGGNPVMSGTSQITITVLDINDNFP
VFEKNTYKVSLHENTPKDTSVIKIIANDADEGPNGEVEFSFGSRTPDVVMSVFEIKSLTG
EIFLKGDLDYEKATSYKIEISVKDKGVPEMESHCRLQVDVVDVNDNTPEIILTSEPKPVR
EDAPSGTVVALLNARDGDSGNNSKVTLSLNKGSPFSLKPSYSNNYALVTNGALDRENFAR
YNIEITATDSGSPPLSSKKNIAVTITDVNDNPPVFTQPFYNVYLKENGVPGSILYSVSAS
DLDSGENAKISYSILDSKVQDVSVSSYVYMNADNGSIYSMHSFDYEKLKVFQIQVQAKDQ
GSPCLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDAD
SGHNAWISYRLAEATDTSLFTVNQYTGEVRTKRAVSEQDESSQRLLIEIKDDGEPLQSAT
ITVSILLEDGLHEPILELRHKTSEPNRKTGRITLYLILSLASVSVLSLVTFLILAVKCIR
NSRSSGSCCMRRSDCDDYKKPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFRSCMSPMS
EYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSRK
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagacaatgggatacagagattggagatggctcgtgctttggtggcatattttc
ttcctcctgtggagtacaatagacggacagactcgttacagcattccagaggaactaaag
cagggctctgtggttggaaatattgctaaagatctgggtttatcttcatctgacatgttt
gaccgtaacctgcgcgtcgcctctgaggctggtgagcagtatttcagtgtggatgcgggg
aagggcgagctgctggtgaatgacaggatagacagagaggctttatgtggacaaagcgcc
agctgtgtgctacctttacaaattgttattgaaaaccctttacatttacatcgactagag
atagaaattaaagacataaacgataatgctccaatatttcttacaaaagaaatgttttta
aaaattgcggaatcggcagcagtaggaactcgattttctctagaaagtgcagaggattta
gactttggaagtaattctgtgaaatcctacactttggcgaaaaatgaatgctttacatta
aaattgaaagaggtcgaggatggtagagcagtccccgagctggtgttagagaagcctctc
gatcgagagaggaaagcagttcatcagctgcgtctcacagctgtagatggaggaaatccg
gttatgtcgggtacctcacaaatcactattactgttcttgatatcaacgacaatttccct
gtatttgaaaaaaatacatataaagtttctttacacgagaatactccgaaagatacttcc
gtgatcaaaatcattgcaaatgacgctgacgagggaccaaacggagaagttgagttttct
tttggttcccggacaccagatgttgtaatgtcggtttttgaaatcaagtcattaacggga
gaaatatttttaaaaggagatttggattatgaaaaagcaacttcatacaagattgaaata
tctgtaaaagacaaaggggttcctgaaatggagagtcactgtcgtctgcaggtagatgtt
gtagatgttaatgacaacacaccagagattattcttacttctgaacctaaacctgtgcgc
gaagacgctcctagcggcacagtggtggctttactcaatgcgcgtgatggtgactctggt
aataatagcaaagttactctatctttaaacaaaggttctccgttcagtttaaaaccttcg
tattctaataattatgcgctggtgaccaacggagctttagaccgagagaatttcgcacgg
tataatattgaaataacagcaactgattcaggctctcctcctttgtccagtaagaaaaat
atagcagtaaccatcactgacgtgaatgataatccccctgtatttactcagcctttctat
aatgtatatttaaaagagaacggagtaccaggttctattctgtactcagtttcagcatct
gatctggattctggtgaaaacgcaaagatctcctattctattctggactctaaagtgcag
gacgtttctgtctcatcttatgtttacatgaacgcagataacggcagcatctacagcatg
cactcgtttgactatgagaagctgaaggtgtttcagatccaggttcaggcaaaggaccag
ggctctccgtgtctcagcagcaacgccactgtccatgtttttatcctggaccagaacgac
aacgcccccgctgttatttacccctcctccgctgccctgggctccctctctcatcagagg
atgccccgctccgctaaagcgggtcacctggttaccaaggtgacggccgtggacgctgac
tcgggccataacgcctggatctcctacagactggcggaggccacagacacctctctgttc
actgtcaatcagtacacaggagaggtgaggactaaacgcgctgtgtccgagcaggacgag
tcctctcagaggctgctgatagagatcaaggacgacggagaaccgcttcagtccgccacc
atcacggtgtccatcctgctggaggacgggctccacgagcccatcttagagctgcgacac
aaaacgtccgagcccaacaggaaaaccggcagaatcaccctgtatctgatcctgtctctg
gcctcggtgtccgtgctgtctctggtgacttttctcatcttagcggttaaatgcatcagg
aacagcagaagcagcgggagctgctgcatgaggcggagcgactgtgatgattacaagaag
cccaacaggaacctgcagattcagctcaacactgatggacccataaagtacgtggaggtc
ctgggaggagacatgatgtctcagagtcagtccttcaggtcctgcatgtctccgatgtca
gagtacagtgatttcactctcattaaacccagcagcaccacagactttaaagaagtcatc
agtgttctggatgcgtctttacccgacagcacgtggacctttgagagccagcaggtgagc
aggaaatga
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