Kryptolebias marmoratus (mangrove rivulus): 108243229
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Entry
108243229 CDS
T05608
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108243229 (scn4ab)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108243229 (scn4ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
108243229
NCBI-ProteinID:
XP_024864429
LinkDB
All DBs
Position
LG12:complement(1069000..1082133)
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AA seq
1827 aa
AA seq
DB search
MERIKITMSGKNPFLDYWRRNKESGAILKRSNQPRASRLKRLLSSPEAREVLRNANMALL
LPPVGTEVFRHFTPASLKEIQRKQAAKQHEAEQQKEEQNKREKTEKAEEDLPQPASDLEA
GKALPFIFGDPPPEFLNTPLEELDPFYQSQKTFIVLSKGNVIYRFNAEPACYLISPFSPL
RTFAIKILIHSLFSLFIMLTILTNCVFMTMSDPPAWSKTVEYVFTAIYTFEATIKILSRG
FCVGKFTFLRDPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKMGDVMILTVFCLGVFALIGLQLFMGNLRQKCVLMPPLNNQTSAEGFNAYNN
SSSTAFDYTEYITNPENHYYLPGQTDAMVCGNSSDAGVCPHGYVCLKAGRNPNYGYTNYD
TFGWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAY
AEQNAATISEAKQKEEEYAQMLEALKRREEEVRCDGWKHPQCFSNIKLNFCFVSLQVEAN
RVALLENQNSTDQKNSETKTHEQDHTAMNDFEEDQRPCPPCWYAFADIFLKWNCCGCWIW
LKQLLYTIVMDPFVDLAITICIVLNTVFMAMEHYPMSPQFDELLSTGNLVFTGIFTAEMI
LKLLAMDPYNYFQVGWNIFDSIIVTVSLVELGLADVEGLSVLRSFRLMRVFKLAKSWPTL
NMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYNDCVCRISEDCELPRWHMKD
FFHSFLIIFRILCGEWIETMWDCMEVAGPAMCLIVYMMVLVIGNLVVLNLFLALLLSSFS
GDNLSASEDEGENNLQIAINRISRAVAWTKAWFMKHVWTLLGKKTTKNSDHKAKNTEKNN
PMEVLPLTFVTSEQPVGQATALNSNPTSYYHNIVSLKVPIAKAESDTESSEDEGDGEQQA
EESVCSTVQRAPEKKEETNEDVISPEDCCTEKCYSRCPCLDIDTSQGRGKIWFNIRKTCF
SIVEHNYFETFIIFMILLSSGALAFEDIYLEQRRVIKVILEYADQVFTYVFVVEMLLKWV
AYGFKTYFTNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEG
MRVVVNALVGAIPSIFNVMLVCLIFWLIFSIMGVNLFAGKFYYCYNETGEYVFQPEVVNN
KTQCIDLINKNFTEVHWRNAKINFDNVGMGYLSLLQVATFKGWMNIMYSAVDSREVESQP
VYEDNLYMYLYFVCFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGTDLFMTEDQKKYYNAM
KKLGSKKPQKPVPRPKNKFQGLVFDLVTKQFFDIFIMVLICLNMVTMMVETDEQSAEKDA
ILYWINLFFIVIFTAECVLKLIALRQHYFAVGWNIFDFVVVILSIVGLLLADIIEKYFVS
PTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSN
FAYVKKEGMMDDIFNFENFGNSMICMFTITTSAGWDGFLIPIMNTPPDCDPDFENPGSAV
RGNCGSPAVAIVFFPLYIIMSFLVVVNMYIAVILENFNVATEESADPLSEDDFEMFYETW
EKFDPKASQFIHYSKLSDLCDALQDPMRIPKPNIAKLIKMDLPLVPEDKIHCMDILLALT
AEVLGESEGMDALKTSIEEKYMANNPSKKLYEPVISTLRTKQEEVSASVIQRAYRRHLLH
RAIKLASYKYREKTKGRRDELPPPETEGLICKNISQLYGDSETLPGDRAEDSPVQVELQT
EFLLHSAPPFNGYNFLQDDSLKESVVE
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggagagaattaaaatcacaatgagcggcaaaaatcccttccttgactactggaggagg
aacaaggagagcggagcgattctgaaaagatccaatcagccgagagcttcacgactgaaa
cggttactaagcagtccagaagcccgggaggttctccgcaatgccaatatggcgcttctg
ctgccccctgttggtacagaggtgttcagacacttcacacctgcctcactaaaagaaatc
cagcgaaaacaagcagctaaacaacatgaagctgaacaacagaaggaagaacaaaataaa
agggagaagactgagaaagcagaggaagatcttcctcaaccagccagtgatcttgaggct
gggaaagcccttcccttcatttttggagacccacctcctgagtttctcaacaccccattg
gaggagttggatcccttctaccaatcacagaagaccttcatcgtgctcagtaaaggaaac
gtcatctacaggtttaacgctgagccggcgtgttacctgatcagcccattcagccctctg
aggacttttgctatcaagatcctcatccattctttattcagtttattcatcatgctgact
attttgaccaactgcgtcttcatgacgatgagcgatcctccggcatggagcaagacggtc
gagtacgtcttcacagccatctacacttttgaggcaaccatcaaaattttgtcccgagga
ttctgtgtggggaagttcaccttcctcagagacccctggaactggctggacttcatggtc
atcagcatggcatatttgactgagtttgtcgatttaggaaatgtttctgctctgaggacg
ttcagagttcttcgagccctgaaaaccatcacagtaatccccggtctgaagacgattgtt
ggcgctctcattcagtccgtgaagaaaatgggtgatgtcatgattctgacagtcttctgc
ctcggggtcttcgctctgattggtcttcagcttttcatgggaaacctgagacagaaatgc
gttctgatgccgccgctgaacaaccagacgtcagctgaaggcttcaacgcctataacaac
agcagcagcactgcctttgactacactgagtacattaccaacccagagaatcattactat
ctgccaggccagactgatgctatggtgtgtggaaacagctctgatgctggagtttgtccg
catggctacgtctgtctgaaggccgggaggaacccaaactacggctacaccaactacgac
acttttggttgggcgtttctggctctgttcagactcatgactcaggacttctgggaaaac
ctgttccagctgacgctgcgagcagcaggtaaaacctacatgatcttctttgtggtggtc
atcttccttggttcgttctacctcatcaacctcatcctggctgtggttgccatggcctac
gctgagcagaacgcagccaccatatctgaagccaaacagaaggaggaggagtacgctcag
atgttggaggccctgaagaggagagaagaggaggtccggtgtgatggatggaagcatcca
cagtgtttctcaaacataaagctgaacttttgttttgtgtctttacaggtggaagccaac
agggtagcgctcttagagaaccaaaactccacggatcagaagaactcagaaacaaagacc
catgaacaagatcacacagccatgaatgacttcgaggaggaccagaggccatgtcctcca
tgctggtatgcatttgctgacatctttctgaagtggaactgctgtggctgttggatatgg
ctgaaacaactgctttacaccatcgtcatggatccatttgtcgacctcgctatcaccatc
tgcattgtcctcaacacagtcttcatggccatggagcattacccaatgtctccacagttt
gatgagctgctgagcactggaaatctggtctttacgggaatctttacagctgagatgatc
ctcaagcttcttgcaatggatccatataactacttccaggttggctggaacatctttgac
agcatcatcgtcaccgtgagtctggtcgagctcggtctggctgatgtggagggtctgtct
gtgcttcgttccttccgactgatgcgagtgtttaaactggccaaatcgtggcccaccctc
aacatgctgataaagattatcgggaactctgtgggggctttggggaacctgacgctggtt
ctcgccatcatcgtttttatcttcgccgtcgtcggcatgcagctgtttggaaagaactac
aatgactgcgtctgccgcatctcagaggactgcgagcttcctcgctggcacatgaaagac
ttctttcactccttcctcatcatcttcagaatcctgtgtggcgagtggatcgagaccatg
tgggactgcatggaggtggcgggtccggctatgtgtctgatcgtctacatgatggtgctg
gttattggaaacctggtggtcctgaatctgttcctggccttgctgctcagctcgttcagt
ggtgacaacctttcagcttcagaagatgaaggagaaaacaatctgcagatcgccatcaac
cggattagcagggccgtggcctggaccaaggcctggttcatgaaacatgtctggactcta
ctgggaaagaagaccacaaaaaactcagaccacaaggctaaaaacacagagaaaaacaac
ccgatggaggttttaccgctgacctttgtgacctcagagcagccagtaggacaagccaca
gccctcaacagtaacccaaccagctactatcataacatcgtatctctgaaggtccccatc
gctaaggccgaatctgacaccgagtcgtctgaagatgagggggatggagagcagcaagct
gaggagtcagtctgcagcaccgtacagagagctcctgaaaagaaagaagagacgaatgaa
gatgttatttctcctgaggattgctgcactgaaaagtgctacagtcgctgcccatgcctg
gacatagacacatcccagggcagaggaaagatctggtttaacatcagaaaaacctgtttc
tccatcgtggagcacaactactttgagacgttcatcatcttcatgatcctgctgagcagt
ggagctctggcgtttgaggacatctacttggagcagcgtcgggtcatcaaggtcattctg
gagtacgcagatcaggtgttcacctacgtctttgtggtggagatgcttctcaagtgggtt
gcctatggattcaagacgtacttcaccaacgcctggtgctggctggacttcctcattgtc
gatgtgtccctggtgtctctgacagcaaacatcctgggatactctgagctgggagccatc
aagtctctgaggactctaagagcactgagacccctgagggccctgtctcgctttgagggc
atgagggtggtggttaatgcactggttggagccatcccctccatcttcaacgtcatgctg
gtgtgtctgatcttctggctgatcttcagcatcatgggcgtgaacctgtttgcagggaag
ttttattactgctataacgagacaggagagtatgtattccaacctgaggttgtcaacaat
aagactcagtgcattgatctgattaacaaaaacttcacggaggtccactggagaaacgcc
aagatcaactttgacaatgtggggatgggctacctgtcgctgctgcaagtggccacattt
aaaggctggatgaacatcatgtactcagcagtggactccagagaggtggagtcccagcca
gtgtatgaggacaacttatacatgtacttgtactttgtttgcttcatcatctttggctca
ttcttcaccctcaacctcttcatcggagtcatcattgataacttcaaccagcagaaagct
aagctcggaggaacagatctgtttatgactgaagatcagaagaagtactacaatgccatg
aagaaactgggctccaagaagcctcaaaaacctgttcctcgacctaagaacaagtttcag
ggtctggtctttgacctggtgaccaagcagttttttgacatcttcatcatggtgttaata
tgcctgaacatggtgaccatgatggtggaaacagatgagcagagcgctgagaaagatgcc
atcctgtactggataaaccttttcttcatcgtcatcttcaccgcagagtgtgttctgaag
ctcatcgctctccggcagcactacttcgctgtcggctggaacatctttgactttgtggtg
gtcatactgtccatcgttggcctgcttcttgctgacatcatagagaaatattttgtttcg
cccactctcttccgtgtgatccgattggctcggattggccgggttcttcgcctcattcgt
ggagccaagggaatccgaacactgctatttgccttgatgatgtcacttcctgccctcttt
aacattggtctcctgctcttcctcatcatgttcatcttctccatatttgggatgtctaac
tttgcctatgtaaagaaggaaggcatgatggacgacatttttaactttgagaactttggg
aacagtatgatctgtatgtttacgatcactacgtcagctggatgggacggttttctcatc
cccatcatgaacacgccaccagactgtgatccagactttgaaaacccgggctcagctgtc
agagggaactgtggcagcccagcagtggcgatcgtcttctttcctttgtacatcatcatg
tccttcctggtggtggtcaacatgtacattgccgtcatattggagaactttaatgtggcc
acagaggaaagcgctgacccactgtccgaggatgactttgaaatgttctatgaaacctgg
gagaagtttgaccctaaggcttcacagttcatccattacagtaagctgtcagacttgtgt
gacgctctgcaagatcctatgaggattcccaaacccaacattgccaagttgatcaagatg
gatctgcccttagttcctgaagacaagatccattgtatggacatcttgctcgctctcact
gcagaggttttgggtgagtcagaagggatggatgctttaaagaccagcatagaagagaag
tacatggccaacaatccctcaaagaagttgtacgaaccagtaattagcaccctgcggaca
aaacaggaagaggtttcagcatcggtgatccagagagcatacaggaggcaccttctgcac
cgagcaatcaaactagcgtcctacaagtacagagaaaagacgaagggtcggcgagacgag
ctgcccccacctgagacagagggacttatctgtaagaacatcagtcagctgtacggagac
agtgagacacttcctggtgatagagctgaggacagtcccgtccaggtggagcttcaaacg
gagtttctcctccactctgctcctccgtttaatggctacaattttctacaagatgacagt
ctgaaggagtcagttgtggaatga
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integrated database retrieval system
