Kryptolebias marmoratus (mangrove rivulus): 108243813
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Entry
108243813 CDS
T05608
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108243813 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108243813 (eftud2)
Spliceosome [BR:
kmr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108243813 (eftud2)
Complex C
U5 SnRNP specific factors
108243813 (eftud2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Roc
Ras
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
108243813
NCBI-ProteinID:
XP_017284992
UniProt:
A0A3Q3BG64
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All DBs
Position
LG12:complement(4593799..4606576)
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AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDEDELDAEDRDVDEGDEDDDDEPADADEDVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVRHKQFTLMEQELPVTVYDMEFLAD
LMDSPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDADLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSMRISDGVVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFAKRLWGDIYFNPKTRKFTKKAP
SSNSQRSFVEFVLEPLYKILSQVVGDVDTTLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGLVDMCVQHVPSPQEGAKTKIEHTYTGGLDSDLGEVMAECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDRSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLVL
SKQDAVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatttgtacgatgagtttgggaactacatcggtccagagctggactctgac
gatgatgaagatgaactggatgcagaggacagagatgttgatgagggggatgaagacgat
gacgatgagcctgcagatgctgatgaggatgtcccgggcatggaggtggtcctgcatgaa
gacaagaagtactatcccacagcggaggaggtttatgggccggaggtggaaactattgtt
caggaagaagacacacaacctctcacagagcccatcattaagcccgtgaggcacaagcag
ttcactttgatggaacaggagttaccggtcactgtttacgacatggaatttcttgcagat
ctgatggacagtcctgagctgatccgtaacgtcaccctctgtggccaccttcatcatggc
aagacctgttttgtggattgcctgattgagcagacacatccagaaattaggaaaagggat
gatgctgatctccggtacacagacatcctttttacagagcaggagagaggggttggcatc
aaaagcactcctgtcacgatggtcctgcctgactccagaggaaaatcttaccttttcaac
atcatggatactccaggccacgtgaacttctctgatgaggtcacatctagcatgaggatc
tcggatggtgttgtccttttcattgatgcagcagaaggagtgatgctgaacaccgagcgt
ctgatcaaacatgcagtccaggagcgcatggccatcaccatctgcatcaacaaggtggat
cggctcattgttgagctcaaactgcctcccacagatgcttactacaagcttcggcacatc
gtggatgaggttaatggtttgctcagcacatattctacagacgagaacttggtggtgtct
cctctccttggaaatgtctgctttgccagctcccaatacagcatctgtttcaccctgggg
tcattcgcaaagatctactctgacacttatggtgatattaactataatgagtttgcaaag
cggctctggggggacatttactttaacccaaaaactcgcaagttcacaaaaaaagctccc
agcagcaactctcagcgcagctttgtggagtttgttctggagcctctctacaagatcctc
tcacaggtggtcggggatgtggacacaactctgccccgagttctggatgagcttgggatc
cacctgacaaaggaggaactgaaactgaacatcagacctctccttcgactggtctgtaac
cgcttctttggagagttcactggccttgtggacatgtgtgtccaacatgtcccttcacca
caagagggtgctaagacgaagatagagcacacctacacgggaggtctcgactcggatctg
ggagaggtcatggccgagtgtgatcctgacggtccgctgatgtgccacaccacaaagatg
tacagcaccgaggatggggtgcagttccacgcgtttggccgggttctgagcggcaccatt
caggcgggtcagccggtgaaggtgctcggagagaactacacgctcgaagatgaggaggac
tctcaggtctgcactgtgggtcgtctctggatctctgtcgccagataccaaattgaggtg
aatcgagtgcctgcagggaactgggtgctgattgaaggctgcgatcagccaatcgtgaag
acggccacaatcacagaacccagagggaacgaagaggctcaaattttcaggccgttgaag
ttcaacacagcatcagtaattaaaatcgcagtggagccagtcaacccgtcagagctgcca
aaaatgttggatggcctgaggaaggtcaacaagagttatccttctctcaccacaaaggtg
gaggagtctggagaacatgtcatcctggggacgggagagctttacctggattgtgttatg
catgatctgcggaagatgtactctgagattgacattaaagtggctgacccagttgtgact
ttctgtgaaacagttgtggagacgtcgtcacttaagtgcttcgctgagacgcccaacaaa
aagaataagatcaccatgattgccgagcccctggagaagggacttgctgaggacatagag
aacgaggtggtgcagatcacgtggaacaggaagaagctgggagagtttttccagacaaaa
tatgactgggatctgctagctgccaggtccatctgggccttcggacccgacacgacggga
ccaaatattcttgtagacgatacgctgccttcagaggtggacaaggcgctgctgggttct
gttaaagacagcatcgttcagggcttccagtggggcaccagggagggacctctctgtgac
gagcccattcgaaacgtgaagtttaagatcctggatgctgtgatcgctcaggagcctctt
cacagaggaggaggtcaggtcatccctacagccaggagggtggtgtactctgccttcctc
atggccactcccaggctgatggagccctattacttcgtcgaggtccaggctccggctgat
tgcgtgtctgcggtctacacggtgctggctcgaaggaggggtcacgtcacccaggacgct
cccattcccggttcccctctctacacaattaaagcttttatcccggcgatagactccttc
ggctttgagacagaccttcgcacccacacacagggtcaggcctttgctctgtccgtcttc
caccactggcagatcgttcctggcgaccccctggacagaagcatcgtgatcaggcctctt
gagccccagcctgcccctcacctggccagagagttcatgatcaagaccagaagacgcaaa
ggtctgagtgaagatgtgagcatcagtaagttcttcgacgatcccatgttgttggttctg
tccaaacaagacgccgtgcttaattatcccatgtga
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