Kryptolebias marmoratus (mangrove rivulus): 108244362
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Entry
108244362 CDS
T05608
Symbol
ldlrb
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03272
Virion - Hepatitis viruses
kmr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108244362 (ldlrb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108244362 (ldlrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108244362 (ldlrb)
Membrane trafficking [BR:
kmr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
108244362 (ldlrb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
SGL
EGF_CA
Psg1
DUF5050
hEGF
TMEM154
DUF4381
Motif
Other DBs
NCBI-GeneID:
108244362
NCBI-ProteinID:
XP_017285988
UniProt:
A0A3Q3BAS3
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Position
LG3:5564277..5575425
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AA seq
851 aa
AA seq
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MMMMTMRLSTYWCLCMLIHCLTQTDAALTCTSTQFKCGNGRCITQRWICDGTDDCGDGSD
ELPGVCAIKTCSESQFNCGGPTNECISKSWHCDGQADCKNGADEKNCTAKQCTDDQFQCA
NGQCVSKTFVCDKENDCSDGSDEKSCPKPTCSPQSFQCNNLVCVPATWLCDGDEDCADGS
DEWPKSCQGKQPKKKTCGANDFECANGNCVHASWRCDGEKDCSDLSDELNCNQTTCRHNQ
FQCNNGTCISDSLKCNSERDCIDGSDEIGCSTEDACKDPTKFRCGSGECISMDKVCDKER
DCSDGSDEPNSVCGKNECLTANGGCSHQCNDLKIGCNCSCPAGYRLKTDNKTCEDINECE
DPDICSQSCINLPGNYKCDCNEGYKIDPVSKTCKAESGGVPTLFFTNKHEVRRIKVDHSE
YVKLISQLKNAVALDIDMPNKKIFWSDLSLKKIFSSSIDEAGDASQHSVVIGSGIEAPEG
IAVDWIHGNIYWTDSILKTISVATTDGSKRRTLVKENLGKPRAITVDPVNNFMYWTDWGG
ESKIEKSGLNGAGRTVLVKDNIEWPNGITLDMVNQRLYWTDSKLHTISSIDVNGGTRHGV
ISGVENLYRPFSLAVFEEKVFWTDTSSSAIFSANRLTGKDITQLVSDLGQPEDMVLYHSF
KQPLGVNWCIQGNIMNGGCEFLCLPAPLTEESAVKYTCACPDNKTLDTDKKKCVKDGSAT
PQVPTKQPSTTTTTTTTTVTSKRPTAGSTNQSTQKPADPQGRIQPVMPEEAPSSHPATLY
IVLPIAVIVMVAFGAVLLWRQWRVKNTNTIHFDNPVYQKTTEDELHIYRNGSDGYVYPER
QMVSMDDLDIA
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgacgatgagactgtccacgtattggtgtctctgcatgctgattcactgc
ttgactcaaacagatgcggccctcacgtgcacctccactcagttcaagtgtggaaacggg
aggtgcatcacccaaaggtggatctgtgacggaactgacgactgcggcgacgggagcgat
gaacttcctggcgtctgcgcgatcaaaacatgctcggagtcacagtttaactgtggtggt
cccaccaatgagtgcatatcaaagagctggcactgcgacggccaagctgactgtaagaat
ggagctgatgagaaaaactgcactgcgaaacaatgcacggacgatcagtttcagtgcgcc
aacggccagtgtgtgtccaagacttttgtctgtgacaaagagaacgactgctccgacggc
tcggacgagaagtcctgtcccaaacccacctgcagcccccagtccttccagtgcaacaac
ctggtgtgtgttcctgccacgtggctctgcgatggagacgaggactgcgccgacgggtcc
gacgagtggcctaagagctgccaggggaagcagccgaagaaaaagacatgtggcgccaat
gactttgagtgtgcgaatgggaactgtgtccacgccagttggaggtgtgatggagaaaaa
gactgctctgatctatcagatgagctcaactgcaaccaaactacttgccgtcataatcag
ttccagtgtaacaacggtacctgtatcagtgacagcctgaagtgtaactcggagcgtgac
tgcatagatggcagtgatgagatcggctgcagcacagaagatgcatgcaaagacccaact
aagttcaggtgtggcagtggggaatgcatcagcatggacaaagtgtgcgacaaggagaga
gactgcagtgacggctctgatgagcctaacagtgtgtgtggaaaaaacgaatgtttaaca
gcaaacggtggctgctcccatcaatgcaacgacctgaagattggctgcaactgctcctgc
cctgctggataccgcctgaagactgacaataaaacatgtgaagacattaatgaatgtgag
gatcctgacatctgcagtcagagctgcatcaacctgcctggcaactacaagtgcgactgt
aatgagggctacaagatcgaccccgtgagcaagacgtgcaaagcagagtcggggggggtg
cccacgctgttcttcacgaacaagcacgaggtgaggaggatcaaggtggaccacagcgag
tacgtcaaactgatctctcagctgaaaaatgcagtggctctggacatagacatgccgaac
aagaagatcttctggtctgacctgtcactgaagaaaatcttcagctccagcatagacgag
gccggcgacgcctctcaacacagcgttgtgattggcagcgggattgaggccccggaaggt
attgcagtggattggatccacggcaacatctactggactgacagcattttgaagaccatc
tccgtggcaaccacagatggcagtaagaggaggactctcgttaaagagaacctcgggaag
ccgagagccatcacagtcgacccagtaaataacttcatgtactggacagactgggggggg
gagtctaaaatcgagaaaagcgggctaaacggagccggtcgcactgtcttagtaaaagac
aacattgaatggcccaatggcattactcttgatatggtcaaccagcgtctgtactggaca
gactccaagctgcacacgatctccagcatcgacgtgaacggagggactcgacacggtgtc
atttccggtgtggagaacctctaccgacccttctcgctggctgtcttcgaggagaaagtt
ttctggactgataccagcagcagcgccatttttagtgccaaccgcctgactggaaaggac
atcactcagttggtctctgacctgggacagccagaggacatggtgctttaccacagcttc
aagcagccactcggtgtaaactggtgcattcagggcaacatcatgaatggaggttgtgag
tttctgtgcctccctgctcctctgaccgaagagagcgctgttaaatacacctgcgcctgt
cctgacaacaagacgctggataccgataagaagaagtgtgtgaaagatggctcagctaca
ccccaagttcccaccaaacagccttccacaacaaccacaactactaccaccactgtaacg
tccaaaaggcccacagctggctcgactaaccagtccacacagaaacctgctgaccctcaa
ggtagaatccagcccgtgatgcctgaggaagccccttcatcccaccctgccactctctac
attgtgttgcccatcgcggttatagtcatggtggcgtttggagcggtgttgctatggaga
cagtggcgcgtgaagaacaccaacaccatccacttcgacaacccggtgtaccagaaaacc
accgaggacgagctgcacatctacaggaacggctcggacggctacgtttaccctgagagg
caaatggtgagcatggacgacttggatatagcataa
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