Kryptolebias marmoratus (mangrove rivulus): 108245053
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Entry
108245053 CDS
T05608
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108245053 (bcl11ba)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108245053 (bcl11ba)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
Actin_micro
Zn_SUZ12
DUF7565
DUF3268
Motif
Other DBs
NCBI-GeneID:
108245053
NCBI-ProteinID:
XP_017287166
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All DBs
Position
LG10:21285410..21324420
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AA seq
839 aa
AA seq
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MSRRKQGNPQHLSQREITPEVEHPDGALLSDTPSPHPLGLLPHPLDPSLAHTLPPGLHTD
HDLLTCGQCQMTFPLGDILLFIEHKKKQCQMQLLPNGCYDKVHDRGGGGGGLQSLHHYAQ
RGELRKVVEPVEIGIQVTPEEEEVVGGRGEGGGRGEKTPTKGICPKQENTPAGGRDEPSN
YICTTCKQPFPSAWFLLQHAQNTHGIRIYLEANPSSSALTPRLTMPPPMGSDSIPQSPLT
SFLGDNNPFHLLRMTGPLLREPPPGFVENRLPNTPPFVSPPPRHHLDPHRLERLSAEEMG
LISQHPSAFERVMRLTPMAIESQSMDFSRRLRELAGNTNSTTPPLSPSRPSPMHRLLNPN
PFQQGPKSPFLSTPPLPPMPPNSTTPPQTQNKVKSCEFCGKTFKFQSNLVVHRRSHTGEK
PYKCQLCDHACSQASKLKRHMKTHMHKAGSMTGRSDDGLSTTSSPEPGTSDVTGEGIKNR
DGDFQGEGNEEEEEEEEEEELENESRPESNFSMESEFYRNRENGTKPPSEEKSALALEKM
VDSGALNSIQQYNNLIVDNRKRMPFSKRGLDGQRDTGDEDSVAGEMNHHQQEERTTINGR
NCGSGDSFSGLFPRKPTPITSPALSNSSNKRIKIEKDLDIPQAPHIPSENVYSQWLVGYA
ASRHFIKDPFLGFTDSRQSPFATSSEHSSENGSLRFSTPPGDLLDGGLSGRSGTASGGST
PHLGGGPGPGRPSSKDGRRCDTCEFCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQ
SSKLTRHMKTHGQLGKEVYRCDICQMPFSVYSTLEKHMKKWHGEHLMTSEVKIEQAERA
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacgcaagcaggggaacccgcagcacctgtcccagagagaaataacgccagaa
gtcgagcacccagatggcgctctgctttccgacacgccgtccccacacccactcggcctg
ctcccccaccctctggaccccagcttggcccacacgctgccgcccggcctccacaccgac
cacgacctgctgacctgtggccagtgccagatgaccttcccgctgggcgacatcctcctc
ttcatcgagcacaaaaagaagcagtgccaaatgcagctgctgcccaacggctgctacgac
aaggtgcacgaccgaggaggaggaggggggggtctgcagagccttcatcactacgcccag
cggggggagctcaggaaggtggtggagccggtggagatcggcatccaggtgacaccagag
gaggaagaagtggtggggggaagaggtgaaggaggtgggaggggagagaagacgcccact
aaaggaatttgccccaagcaggagaacacaccagcaggtggcagagatgagccctctaac
tacatatgtaccacctgtaagcagccgttccccagcgcctggtttctgctgcagcatgcc
cagaacacccacggcattcgcatctatctggaggccaacccctccagctcagccctcacc
cctcgactcaccatgcctccaccgatgggcagtgactccatccctcagtctcctctaacc
agctttctgggggacaacaatccgtttcatctactgaggatgacgggacctttgcttcga
gaaccacccccaggtttcgtggaaaaccgtctccccaacaccccgccgtttgtcagtccg
cctccccgccatcacctggacccccatcgactggaacgccttagtgcagaggaaatgggc
ctcatctcccagcacccgagtgccttcgagagggtgatgcggctaacaccgatggccata
gagtcccagtccatggacttttccaggcggttacgtgagctggcagggaacactaacagc
accacaccaccactctcacccagcagacccagccctatgcaccgactactaaaccccaat
ccttttcaacaagggcctaaatcgccctttctaagtacccctcccctgccgccaatgccc
ccaaacagcaccacccctccccagacacagaataaagtcaagtcctgtgagttctgcggt
aagacattcaagtttcagagcaacttggtggtgcatcggcgcagccatactggggaaaaa
ccatacaagtgccagctgtgtgatcatgcctgttcccaggccagcaagctgaagcgccac
atgaagacccacatgcacaaagctggatccatgacagggcgctcagatgatggactttcc
accacaagctcccctgaaccgggaactagtgacgtcactggcgagggcattaaaaatcgc
gatggggatttccagggggaaggcaatgaggaagaggaggaggaggaggaagaggaagag
cttgagaatgagagccgaccagaatcgaacttcagcatggagtctgagttttaccgtaac
agagagaatggtacgaagcctccttcagaagagaagtcggctcttgcccttgagaagatg
gtggacagtggggcactcaactccatacagcagtacaataacttgatagttgacaatcgt
aaaagaatgcccttctctaagaggggcttagatggccagcgggacactggagatgaggat
tcagttgctggggagatgaaccaccaccagcaggaggagcggacaaccattaatggccgg
aactgtggctccggtgactctttctcaggcctcttcccccgaaagcccacccccatcacc
agccccgctttgtccaactcctccaacaagaggatcaagatcgagaaggacttggacatt
ccccaggctccccacatcccttctgagaacgtgtactcccagtggttggtgggctacgct
gcctcacgacacttcatcaaagaccctttcttaggcttcactgactccagacaatcgccc
tttgccacctcctctgagcactcatccgagaacggcagcttgcggttctcaacgcctccg
ggagaccttctggacggcggactctccggccgcagcggaaccgccagcgggggcagcaca
cctcacctaggcggaggtcccggcccgggtcgaccaagctccaaggacgggaggaggtgt
gacacctgcgaattctgtggcaaggtgtttaaaaactgcagcaacctgacggtgcaccga
cgcagtcacacaggagaacggccctacaagtgtgagctgtgcaactatgcatgcgctcag
agctccaagctcacccgccacatgaagacacatggccagctcggtaaggaagtctaccgc
tgtgacatttgccaaatgccctttagtgtgtacagcactctggaaaaacacatgaaaaag
tggcatggagaacatttgatgaccagtgaagtcaaaattgaacaagcagagagagcctaa
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