Kryptolebias marmoratus (mangrove rivulus): 108247446
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Entry
108247446 CDS
T05608
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
kmr00536
]
108247446
Glycosaminoglycan binding proteins [BR:
kmr00536
]
Heparan sulfate / Heparin
Axon guidance molecules
108247446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRRCT
LRRNT
LRR_1
LRR_9
LRR_14
EGF_TEN
hEGF
LRR_EndoS
EGF_Teneurin
EGF_DL_JAG
EGF_MSP1_1
EGF_CA
Motif
Other DBs
NCBI-GeneID:
108247446
NCBI-ProteinID:
XP_037830849
LinkDB
All DBs
Position
LG3:complement(996673..1133937)
Genome browser
AA seq
1570 aa
AA seq
DB search
MLAGRRGNGARSGGCRMRAASGWAFCSGVWMMLAWGVLVLLVGQGGAEACPAPCSCLGNT
VDCHGLGLHSIPKSIPRGTERLDLNGNNLTVITKTDFSGLKHLRVLHLMENYISNFERGT
FDELKELERLRLNRNRLSHLPELLFQKNEALSRLDLSENAIQAIPRRAFRGATDLKNLQL
DKNHINCIEEGAFRALRSLEVLTLNNNNISTIPVSSFNHMPKLRTFRLHSNSLRCDCHLA
WLSPWLRQRPALGLYTQCSSPPSLRGLNLAELRKSDFACSGYSGSAFVQPCSLASGSCPP
MCSCSNNIVDCRGRGLTAIPAHLPEAMTEIRLEQNGIKSVPPGAFTSYKKLRRIDLSNNQ
ISEIAPDAFHGLRALNSLVLYGNKITELPSGVFDGLVSLELLLLNANKIHCIRATVFKDL
ENLALLSLYDNKIQSLAKGTFSSLHSIQTLHLAQNPFVCDCNVKWLSDFLRSNPIETSGA
RCASPRRLANKRIAQIKSNKFRCSAKEQYHIPGSEDRHLSYECNSKPVCPAKCRCEANVV
DCSNLRLTKFPEHLPPYTEELRLNNNDLSMLEATGAFKGLSQLKKINLSNNKISEIEDSA
FEGASSVVELHLTANHLESVRGSIFKGMEGLRMLMLRNNRISCIHNGSFTGLTNVRLLSL
YDNQLSTILPGAFDMLPNLSTLNLLANPFNCDCRLSWFGAWLRSRRIVTGNPRCQSPAFL
REIPLQDVAVPDFRCEDGTVLDDSSCAPGPQCPTQCNCMDTVVRCSNKHLQALPRGLPRN
VTELYLDGNQFTSVPKELASFKYLQLVDLSNNKIRSLSNDSFSNMSQLTTLILSYNSLRC
IPPLALAGLHSLRLLSLHGNDISELQQGIFSDVASLSHLAIGANPLYCDCRLLWLSDWVK
SGYKEPGIARCAGPRGMQGKLLLTTPADNFQCLDPVEASVQAKCSPCVSSPCQNQGICQA
HHTQQYTCSCKSGFTGKHCETPVDACVSNPCTNGGSCLSDEQTEGFSCACAYGFHGTFCE
VNVDDCEDHGCDNGATCVDGVGNYTCLCPPNYTGLFCEEEEDVCFPGRNPCQHQSTCISS
LTGPRCVCIPGWVGSDCSIDYDECVDHRCQNGAQCIDHLDGYSCVCLQGFSGEFCEVAPP
QTPCQLAQCQNDAPCEEKMGVAVCQCSPDFEGQKCEKLVSVNFVNKDSYVQLQDIKKWPE
TNITLQVSTAEDNGILLYNGDDEPIAVELHQGHVRVTYDPGNQPATTIYSAETVNDGRFH
TVELVTFDRMVNLSVDGGEPTSLDSLGRSQSATKEALLYVGGMPEKVIPSSLGLSSQTFN
TSSFHGCIRNLYINHELQDFTRSHMKPGVVPGCQPCRKLYCLHGICQPNTAQGPQCHCQQ
GWTGQHCDQPITGGLSGMDVVTMATGINPCKGSKCVKGVCVVLDAQTYRCDCEEGYGGAL
CNLQEEPAGSCLGLPCLHGQCQKTEDGENCICEQGYTGESCDIESPCRGEPVRDYHLLQH
GTVLCQTSKPFSWVECQGRCQTDTERGVGTGSCCAPLRIRRRRLTFECTNGTSFTQDVEK
PVECGCKECV
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctgggagaagagggaatggagccaggtcaggaggctgcaggatgagagcagcc
tcaggctgggctttctgttctggggtatggatgatgctggcatggggggttctggttctc
ctggtgggtcagggaggtgctgaagcatgtcctgctccctgcagctgcctggggaacaca
gtggactgtcatggactgggactccactccatacccaaaagcatccccagagggactgag
aggctggatctaaatgggaacaatctgacggtcataaccaagacagacttctctggtctc
aaacacctcagagttcttcacctgatggagaactatatcagtaactttgaaagaggaact
tttgatgaactaaaagagctggaaagacttcgcctaaacagaaatcgtctcagccatctt
ccagagctgctctttcagaagaatgaagctctgtcccgactggatttgagcgaaaatgcc
atccaggccatcccaaggagggcttttagaggggccacagatctcaaaaatcttcaactg
gataaaaatcacatcaactgtattgaggaaggagcgtttcgagctcttcgatctctggaa
gtgctcacattgaacaacaacaacatcagtaccatcccagtctctagcttcaaccacatg
ccaaagctccgcacatttcgtctccattccaactccctgcgctgtgattgtcacctggcc
tggctgtctccttggctgcggcagcgaccagcattgggcctctacactcagtgcagttct
cctccctctctgagaggcctcaacctcgctgagctgcgaaagagtgactttgcctgctca
ggttacagtggcagtgcctttgttcagccatgcagtttggcatctggatcctgtcctcca
atgtgttcctgcagtaacaatattgtggactgtcgtgggaggggacttaccgccatccct
gcccacctgccagaggccatgactgagatccgtcttgaacagaatggcatcaagtcggtt
cctccaggcgccttcacctcctacaagaagctccgccgaatagacctgagtaacaaccag
atatctgaaattgctcctgatgcgttccatggcctccgagccctgaactcactggttctg
tatgggaataagatcactgagctgccaagtggagtttttgatggcctggtctctctggag
ttgttgttgctgaatgcaaataagatccattgtatccgtgccacagtatttaaagacttg
gagaacctggccctcctttcactctatgacaacaagatccagagtctggctaaaggcacc
ttcagctctctgcacagcatccagacactccacctggcccagaacccctttgtttgtgac
tgtaatgtaaagtggctgtcagacttcctgcgttcaaaccccatagagacgagtggagca
cgatgtgccagtcctcgccgcctcgccaacaaacgcatcgcacagatcaagagtaacaag
ttcagatgctccgccaaggagcagtatcacatcccaggctctgaagacagacatctaagc
tacgagtgcaacagtaagccggtgtgtcctgctaaatgtcgctgtgaggccaacgtggtc
gactgctctaacctgcgcctcaccaagttccctgaacacctgcctccctacactgaagaa
ctgcgtctcaacaacaatgacctttccatgctggaggccactggagctttcaagggcttg
tcacaacttaagaaaattaacctgagcaacaacaagatctcagagattgaggatagtgca
tttgaaggagcctcctctgtggtggagcttcacctcacagccaaccacctggagtctgtg
aggggaagcatatttaaaggcatggagggcctgcgcatgctgatgctgaggaacaacagg
atcagttgtatccataatggcagcttcacaggactgaccaatgtcaggctgctctccctc
tatgacaaccagctgagcaccatcctgccgggagccttcgacatgctgcccaacctgtcc
acattaaacctcttggccaatcccttcaactgtgactgccgcctgtcctggtttggagcg
tggctgaggagccgccgtattgtgactggaaatcctcgctgtcagagccctgcctttctc
cgagagattcctctgcaggacgtagctgtgcctgattttcgctgcgaggatggcactgtg
ctggatgacagcagctgtgccccggggcctcagtgtcccactcagtgtaactgtatggac
acagtggtccgctgcagcaacaaacacctgcaggctctacccagaggactgccacgcaac
gtcactgagctgtatttggatggtaaccagttcaccagtgttcccaaagagttagcctcc
ttcaaatacctgcagcttgtagatctgagcaacaataaaatcagatcgctgtccaatgac
tccttctcaaacatgagccaactaaccacactaattctcagttacaactcattacgatgt
atccctcctctggcactggctggcctgcattctctgagactgctctctctccatggcaac
gacatctctgagctgcagcagggaatcttcagcgacgtggcctccctttctcacctagcg
attggagccaaccctctgtactgtgactgccgtctgctctggctgtcagactgggtgaag
agcggctataaggagcctggtatcgcccgctgcgccggcccccgcggcatgcagggcaag
ctgctgctcaccacgcctgctgacaacttccagtgtctggatccagtggaggcttctgtt
caggccaaatgcagtccctgtgtgtcctccccctgccagaaccagggcatctgccaagcc
caccacacacaacagtacacatgtagctgcaagtccggcttcacgggtaaacactgtgag
actccggttgatgcctgtgtcagtaatccctgcaccaacggagggagctgcctcagtgat
gagcagacagagggattcagttgtgcctgtgcctatggtttccatggcactttttgcgag
gtgaatgtggacgactgcgaggaccacggatgtgacaatggcgccacatgtgttgatgga
gttggtaactacacctgtttgtgtcctcctaactacacaggtctgttttgtgaagaggaa
gaagatgtttgttttcctggtagaaacccctgtcagcatcagtccacctgtatcagcagt
cttacaggccccaggtgtgtgtgtattccaggctgggtggggtcagactgcagcatagac
tatgatgaatgtgtggatcatcgctgtcagaacggagctcagtgtatcgaccatctggat
ggctacagctgcgtctgtctgcaaggattcagtggtgagttttgtgaggtggctcctcct
cagacaccctgccagctggctcagtgtcagaacgacgccccctgtgaggagaagatggga
gttgcagtctgtcagtgctcaccagattttgagggtcagaagtgtgagaagctggtcagc
gtcaactttgtcaataaagattcttatgttcagcttcaagacatcaaaaagtggcctgag
actaacatcacactacaggtgtcaacggcagaggacaatggcatcctgctgtataatgga
gatgatgagccaatcgctgtggagctccatcagggtcatgttagggtcacctatgaccct
gggaaccaacctgccaccaccatttacagcgctgaaacagtaaatgatggacgtttccac
acggtcgagctggtgacctttgaccggatggtaaatctatcagtggatggaggagagcca
acgagcctggacagtctgggtcgcagccaatcagccacaaaggaggcccttctctatgtg
ggaggtatgcctgagaaggtcattccgtcctctctgggactctcttctcagacgttcaac
acatccagtttccacggatgcatcaggaatctttacatcaaccatgagttgcaggatttt
acccgcagccatatgaagccaggggtagttccaggctgtcagccctgccgcaaactttac
tgcctgcacggcatatgccaacccaacactgcacagggcccccagtgtcactgccagcaa
ggttggacaggacaacactgtgaccagccaatcacaggaggtcttagtggaatggatgtt
gtcaccatggcaactggtatcaacccttgtaaaggcagcaagtgtgtgaagggtgtttgt
gtggtgttggacgcacaaacctacaggtgcgattgtgaggagggatacggaggagcactg
tgtaacctacaggaggagcccgccggttcctgcctggggctgccgtgtctgcatggccag
tgtcagaagacggaggatggagagaactgtatctgcgagcaggggtacaccggagagagc
tgtgatatagagtctccatgtcgaggtgaacccgtcagagattaccacctgctgcagcac
ggcactgtcctctgtcagacgtccaaacctttctcctgggtcgagtgtcagggccgatgc
caaacagacacagagcggggagttggaactggctcctgctgtgctcctctgaggatccga
cggcgacggcttaccttcgaatgcaccaacgggacctcattcacacaagacgtggagaag
cctgtggaatgtggctgcaaggagtgtgtgtag
DBGET
integrated database retrieval system
