Kryptolebias marmoratus (mangrove rivulus): 108248215
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Entry
108248215 CDS
T05608
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
kmr01009
]
108248215 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108248215 (trpc5a)
Protein phosphatases and associated proteins [BR:
kmr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108248215 (trpc5a)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108248215 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
YxzE
PAC4
LHD_TRPY1
Serglycin
Motif
Other DBs
NCBI-GeneID:
108248215
NCBI-ProteinID:
XP_017292318
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All DBs
Position
LG7:2528700..2657098
Genome browser
AA seq
1084 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWVVKLVTCFIIGLLFPVFSLIYLLAPKSAL
GRFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSVWYLLMWLHNKLCRRGQPPGESSHKCENLREFTERHADSLIQNQHYQ
EVIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRHYSSS
SETTKDDAAVASEDDSESGDGGGGGVGVQKSKSVTFSNPVEEDRRPGPMLGVSALVRSIS
GMTRIDRGQEGQLEEVMGWGEEEEEEEGKPKSNGLKTAVIPPSSTTILPSSSSSFSTTLS
SSLARTKNRLQRLSAPSSKTDSFKRLSYLFSRSKRKAPPTPLPLQSPPSFTISDGLLRPL
GGHSHSDFTRSDTHLNEVGRSVDNPSFSPRRTNGRDSLLALPLPPPCPCQSLHCASNMSE
SSARLLDSSEDVFQSEGVERAGEGGVDGDGGGGLRMMIGGWVGPCEDVLGDSCDVIEDSV
TTQL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgacgcagctttactacaaaaaggcgacatattcgccgtaccgagaccgc
atcccgcttcagatcgtcagagctgaagtggagctgtctgcagaggagcgggcctacctc
actgctgtagagaaaggtgactatgcaggagtcaaacacgccctccgcgaggcggaggtc
tactacaacatggacgtgaactgcctggacccgctgggccgcagcgcgctcctcatcgcc
atcgagaacgagaatctggagatcatggagctcctgttggaccacggcatccacacgggc
gacgccctgctgtacgccatcaggaaggaggtggtgggcgccgtggagctgctgctgtcg
caccggaggccgagcggcgagaaacaggttccctcactgatgatggacagccagttctca
gagttcacccctgacataactcccatcatgctcgctgctcacaccaacaactacgagatc
atcaagctgctcgtccagagaaaggtcaccatcccccgaccgcaccagatacgatgtgac
tgtgtcgagtgtgtatccagttcagaggtcgacagccttcgtcattcacggtctcgactc
aacatctacaaggctctggcctcgccctctctcatcgcgctgtccagtgaagatcccatc
ctaacggccttcaggctgggctgggaactcaaagaactcagcaaggtggagaacgagttt
cgtcaggagtacgaagagctgtctcagcagtgcaaacgtttcgccaaagacctcctggat
caggccagaagttcgagagagcttgagaccatcctgaaccaccgagacaacgaccagagc
gaggaactggaccccaggcagtgccacgacttggccaagctcaaactcgccatcaagtac
caccagaaagagtttgtggcgcagccgaactgtcagcagctgctggccactctgtggtac
gacggcttcccgggctggaggcggcgacactgggtggtcaaactggtcacctgcttcatc
atcggactcctgtttcccgtcttctcactgatctacctgttggcaccaaagagcgctctt
ggacgcttcattaagaagcccttcatcaagttcatctgccacacggcgtcctacctgacc
ttcctcttcctcctgctgctggcctcgcagcacatcgcccgcaccaacctgcacatgcag
ggacctccgcccaccatcgtggagtggatgatccttccgtgggtgctgggcttcatctgg
gcagagatcaaggagatgtgggacggaggattcacagagtacatccacgactggtggaac
ctgatggacttcgccatgaactccctctacctggccaccatctctctgaagatagtggcc
tacgttaagtataactcgtctcgtcccagggaggagtgggagatgtggcacccgacgctg
atagccgaggctctgttcgccatcgccaacatcttcagctcgctcagactcatctccctc
ttcacagccaactcccacctcgggcctctgcagatctcactggggaggatgctgctggac
atcctcaagtttctcttcatttactgtctggtcctgttggcgtttgctaacgggttaaac
cagttgtatttctactatgagaccaaggcgtcggaagaaccaaacaactgcaaaggaatt
cgctgtgaaaagcagaacaacgctttctccacgttatttgagaccctccagtccctcttc
tggtccatattcggtctgctgaacctgtacgtcaccaacgtgaaggctcgtcacgagttc
acggagttcgtcggggcgacgatgtttggcacgtataacgtcatctcgctggtggttctg
ctcaacatgctgatcgccatgatgaacaactcctaccagctgatcgctgaccacgctgac
atcgaatggaagtttgcccgcaccaagctgtggatgagttactttgatgagggcggcacg
ctgccgcctccgttcaacatcatccccagcccgaagtccgtctggtacctgctgatgtgg
ctccacaacaagctgtgcaggagaggccagccgcccggggagagctcgcacaaatgtgaa
aacctccgggagttcacggagcgtcacgctgacagtctgatacagaaccagcattatcag
gaagtgatccggaacctggtaaagagatacgtggcggccatgatacgcagcgcgaaaaca
gacgaaggactgacagaagaaaactttaaggagttgaaacaggatatctccagtttccgc
tacgaggtgttggatcttctcggcaaccggcgtcctccacggcgacactactcttcctcc
agcgagaccacgaaagacgacgccgccgtggcttcggaggacgacagcgaatcaggcgac
ggcggtggagggggagtcggagtccagaagtcaaaaagcgtcacgttctccaacccagtg
gaagaggacagaaggccgggcccgatgctcggcgtgtccgcgctcgtgcgctccatttcg
ggaatgacacggatagacagagggcaggagggtcagctggaggaggtgatggggtggggg
gaagaggaggaggaagaggaggggaaaccaaagagcaacgggttgaagactgccgtcatc
cctccgtcctccaccaccatcctcccctcatcgtcttcatcgttctccaccacgttgtct
tcatcgctcgcccgcacaaagaaccgcctgcagcgcctctcggcccccagctcaaagacg
gactccttcaaacgcctctcctacctgttctcgcgctccaaacgcaaagccccgcccaca
ccgctccccctccagtccccgccttccttcaccatctccgacgggttgctccgaccgctg
gggggccacagccactctgacttcaccaggagcgacacccacctgaacgaggtgggccgc
tcggtggacaacccgtcgttctcgccacggagaacgaacgggcgggactctctcctggcg
ctgcccctcccgcccccatgcccctgccaatccctgcactgtgcttccaacatgtccgag
tccagcgcacgcctcctggactccagcgaggacgttttccagagcgagggcgtggaaagg
gcgggcgagggcggcgtggatggggacgggggtggggggttgaggatgatgattggcggg
tgggtgggaccctgtgaggatgtcttaggggacagctgtgacgtcatagaggactccgtc
accacgcagctatag
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